RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 RPL27AP46776 148 aaKnown RBP17.64■□□□□ 0.41
PTPN13-205ENST00000502971 WT1-ASQ06250 92 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 TNXAQ16473 311 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 ZNF787Q6DD87 383 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 TEPPQ6URK8 271 aa17.64■□□□□ 0.41
PTPN13-205ENST00000502971 CARHSP1Q9Y2V2 147 aaKnown RBP17.64■□□□□ 0.41
PTPN13-205ENST00000502971 PTPN13Q12923 2485 aa17.63■□□□□ 0.41
PTPN13-205ENST00000502971 TNCP24821 2201 aa17.63■□□□□ 0.41
PTPN13-205ENST00000502971 IGHV4-61A0A0C4DH41 118 aa17.63■□□□□ 0.41
PTPN13-205ENST00000502971 ADCYAP1P18509 176 aa17.63■□□□□ 0.41
PTPN13-205ENST00000502971 COMPP49747 757 aaPredicted RBP17.63■□□□□ 0.41
PTPN13-205ENST00000502971 ACOT6Q3I5F7 207 aaPredicted RBP17.63■□□□□ 0.41
PTPN13-205ENST00000502971 RPP25LQ8N5L8 163 aaKnown RBP17.63■□□□□ 0.41
PTPN13-205ENST00000502971 OR10G4Q8NGN3 311 aa17.63■□□□□ 0.41
PTPN13-205ENST00000502971 OR10G9Q8NGN4 311 aa17.63■□□□□ 0.41
PTPN13-205ENST00000502971 OR10G7Q8NGN6 311 aa17.63■□□□□ 0.41
PTPN13-205ENST00000502971 MGST2Q99735 147 aa17.63■□□□□ 0.41
PTPN13-205ENST00000502971 IGKV1D-33P01593 117 aa17.62■□□□□ 0.41
PTPN13-205ENST00000502971 IGKV1-33P01594 117 aa17.62■□□□□ 0.41
PTPN13-205ENST00000502971 SFTA3P0C7M3 94 aa17.62■□□□□ 0.41
PTPN13-205ENST00000502971 M6PRP20645 277 aa17.62■□□□□ 0.41
PTPN13-205ENST00000502971 GPX4P36969 197 aaPredicted RBP17.62■□□□□ 0.41
PTPN13-205ENST00000502971 RAB31Q13636 194 aa17.62■□□□□ 0.41
PTPN13-205ENST00000502971 SSX2Q16385 188 aa17.62■□□□□ 0.41
PTPN13-205ENST00000502971 NPBQ8NG41 125 aa17.62■□□□□ 0.41
PTPN13-205ENST00000502971 CACNG8Q8WXS5 425 aa17.62■□□□□ 0.41
PTPN13-205ENST00000502971 PERPQ96FX8 193 aa17.62■□□□□ 0.41
PTPN13-205ENST00000502971 LPAR2Q9HBW0 351 aa17.62■□□□□ 0.41
PTPN13-205ENST00000502971 RBFOX3A6NFN3 312 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 C9JQL5 133 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 OR13C7P0DN81 318 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 OR2T10Q8NGZ9 312 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 RNASEH2CQ8TDP1 164 aaKnown RBP17.61■□□□□ 0.41
PTPN13-205ENST00000502971 MALSU1Q96EH3 234 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 GGTLC1Q9BX51 225 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 ACTR3CQ9C0K3 210 aaPredicted RBP17.61■□□□□ 0.41
PTPN13-205ENST00000502971 FBXL15Q9H469 300 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 SLC39A9Q9NUM3 307 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 AKAP6Q13023 2319 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 CTXND1A0A1B0GTU2 59 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 NBR2O15453 112 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 CYB5BO43169 146 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 DEFA5Q01523 94 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 PAX8Q06710 450 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 CD69Q07108 199 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 MMDQ15546 238 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 LCN15Q6UWW0 184 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 TMEM144Q7Z5S9 345 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 C1orf159Q96HA4 380 aa17.61■□□□□ 0.41
PTPN13-205ENST00000502971 IGHV4-30-2A0A087WSY4 118 aa17.6■□□□□ 0.41
PTPN13-205ENST00000502971 IGLC7A0M8Q6 106 aa17.6■□□□□ 0.41
PTPN13-205ENST00000502971 MAP1LC3B2A6NCE7 125 aa17.6■□□□□ 0.41
PTPN13-205ENST00000502971 NDUFA3O95167 84 aa17.6■□□□□ 0.41
PTPN13-205ENST00000502971 SNRNP70P08621 437 aaKnown RBP17.6■□□□□ 0.41
PTPN13-205ENST00000502971 PLGLAQ15195 96 aa17.6■□□□□ 0.41
PTPN13-205ENST00000502971 SSX7Q7RTT5 188 aa17.6■□□□□ 0.41
PTPN13-205ENST00000502971 SVBPQ8N300 66 aa17.6■□□□□ 0.41
PTPN13-205ENST00000502971 ZNF114Q8NC26 417 aa17.6■□□□□ 0.41
PTPN13-205ENST00000502971 EAF1Q96JC9 268 aaPredicted RBP17.6■□□□□ 0.41
PTPN13-205ENST00000502971 P2RX4Q99571 388 aa17.6■□□□□ 0.41
PTPN13-205ENST00000502971 MAP1LC3BQ9GZQ8 125 aa17.6■□□□□ 0.41
PTPN13-205ENST00000502971 SCO1O75880 301 aa17.59■□□□□ 0.41
PTPN13-205ENST00000502971 EBI3Q14213 229 aa17.59■□□□□ 0.41
PTPN13-205ENST00000502971 SRSF8Q9BRL6 282 aaKnown RBP17.59■□□□□ 0.41
PTPN13-205ENST00000502971 PPT1P50897 306 aa17.58■□□□□ 0.41
PTPN13-205ENST00000502971 GNB1P62873 340 aa17.58■□□□□ 0.41
PTPN13-205ENST00000502971 PMS2P11Q13670 270 aa17.58■□□□□ 0.41
PTPN13-205ENST00000502971 ZNF506Q5JVG8 444 aa17.58■□□□□ 0.41
PTPN13-205ENST00000502971 DYNAPQ8N1N2 210 aa17.58■□□□□ 0.41
PTPN13-205ENST00000502971 PXMP4Q9Y6I8 212 aa17.58■□□□□ 0.41
PTPN13-205ENST00000502971 RPL29P47914 159 aaKnown RBP17.58■□□□□ 0.4
PTPN13-205ENST00000502971 GAMTQ14353 236 aa17.58■□□□□ 0.4
PTPN13-205ENST00000502971 HES1Q14469 280 aa17.58■□□□□ 0.4
PTPN13-205ENST00000502971 PVRIGQ6DKI7 326 aa17.58■□□□□ 0.4
PTPN13-205ENST00000502971 NRGNQ92686 78 aa17.58■□□□□ 0.4
PTPN13-205ENST00000502971 RARRES2Q99969 163 aa17.58■□□□□ 0.4
PTPN13-205ENST00000502971 SLC35B3Q9H1N7 401 aa17.58■□□□□ 0.4
PTPN13-205ENST00000502971 CELSR2Q9HCU4 2923 aa17.57■□□□□ 0.4
PTPN13-205ENST00000502971 SPG11Q96JI7 2443 aa17.57■□□□□ 0.4
PTPN13-205ENST00000502971 SEC14L6B5MCN3 397 aa17.57■□□□□ 0.4
PTPN13-205ENST00000502971 FAM122CQ6P4D5 195 aa17.57■□□□□ 0.4
PTPN13-205ENST00000502971 SLC16A13Q7RTY0 426 aa17.57■□□□□ 0.4
PTPN13-205ENST00000502971 SLC35E1Q96K37 410 aa17.57■□□□□ 0.4
PTPN13-205ENST00000502971 CENPEQ02224 2701 aa17.57■□□□□ 0.4
PTPN13-205ENST00000502971 NBPF19A0A087WUL8 3843 aa17.57■□□□□ 0.4
PTPN13-205ENST00000502971 TACC2O95359 2948 aa17.56■□□□□ 0.4
PTPN13-205ENST00000502971 YIF1AO95070 293 aa17.56■□□□□ 0.4
PTPN13-205ENST00000502971 FGF8P55075 233 aaPredicted RBP17.56■□□□□ 0.4
PTPN13-205ENST00000502971 HAGHQ16775 308 aa17.56■□□□□ 0.4
PTPN13-205ENST00000502971 KHDC3LQ587J8 217 aa17.56■□□□□ 0.4
PTPN13-205ENST00000502971 MIC13Q5XKP0 118 aa17.56■□□□□ 0.4
PTPN13-205ENST00000502971 C17orf50Q8WW18 174 aa17.56■□□□□ 0.4
PTPN13-205ENST00000502971 SRSF12Q8WXF0 261 aaKnown RBP17.56■□□□□ 0.4
PTPN13-205ENST00000502971 SLC25A22Q9H936 323 aa17.56■□□□□ 0.4
PTPN13-205ENST00000502971 TEX22C9J3V5 150 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 FCN1O00602 326 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 CDC34P49427 236 aaPredicted RBP17.55■□□□□ 0.4
PTPN13-205ENST00000502971 B2MP61769 119 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 SSBP2P81877 361 aaPredicted RBP17.55■□□□□ 0.4
PTPN13-205ENST00000502971 Q8N6K4 173 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms