RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 SPANXN5Q5MJ07 72 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 IBA57Q5T440 356 aaKnown RBP0.12□□□□□ -2.39
SMAD1-203ENST00000502342 CST9Q5W186 159 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 PDPK2PQ6A1A2 396 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 PHF13Q86YI8 300 aaPredicted RBP0.12□□□□□ -2.39
SMAD1-203ENST00000502342 TMEM161BQ8NDZ6 487 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 GPR32P1Q8NGA4 272 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 OR2T4Q8NH00 348 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 DNAJB3Q8WWF6 145 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 RASSF5Q8WWW0 418 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 OPTNQ96CV9 577 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 SMR3AQ99954 134 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 C10orf95Q9H7T3 257 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 ACER3Q9NUN7 267 aa0.12□□□□□ -2.39
SMAD1-203ENST00000502342 CEP192Q8TEP8 1941 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 TRBV6-8A0A0A6YYG3 113 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 TRAV1-1A0A0B4J248 108 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 F5H768 121 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 SSNA1O43805 119 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 PRH1P02810 166 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 PRM2P04554 102 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 HTR1AP08908 422 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 FAM228BP0C875 321 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 CRYGAP11844 174 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 MAP3K7CLP57077 242 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 SRSF6Q13247 344 aaKnown RBP0.11□□□□□ -2.39
SMAD1-203ENST00000502342 COQ5Q5HYK3 327 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 DEFB128Q7Z7B8 93 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 COMMD7Q86VX2 200 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 Q8N402 240 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 DIRAS2Q96HU8 199 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 SCGB3A1Q96QR1 104 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 TMEM147Q9BVK8 224 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 CHMP4BQ9H444 224 aaKnown RBP0.11□□□□□ -2.39
SMAD1-203ENST00000502342 TNRC6AQ8NDV7 1962 aaKnown RBP0.11□□□□□ -2.39
SMAD1-203ENST00000502342 RALGAPA2Q2PPJ7 1873 aa0.11□□□□□ -2.39
SMAD1-203ENST00000502342 FRAS1Q86XX4 4008 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 TRBV20OR9-2A0A075B6H5 130 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 A0A0J9YY10 115 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 A0A1B0GX78 115 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 IQCF5A8MTL0 148 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 M0R2N4 97 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 OCMP0CE72 109 aaPredicted RBP0.1□□□□□ -2.39
SMAD1-203ENST00000502342 CCL20P78556 96 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 IFITM2Q01629 132 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 MGAT3Q09327 533 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 PDE6HQ13956 83 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 KISS1Q15726 138 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 GRK1Q15835 563 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 KHDC3LQ587J8 217 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 AADACL3Q5VUY0 350 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 DPPA3Q6W0C5 159 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 Q6ZQT0 140 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 BPIFA4PQ86YQ2 179 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 IQCF2Q8IXL9 164 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 OR4E2Q8NGC2 313 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 CNBD2Q96M20 576 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 C7orf50Q9BRJ6 194 aaKnown RBP0.1□□□□□ -2.39
SMAD1-203ENST00000502342 ULBP3Q9BZM4 244 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 MAP1LC3AQ9H492 121 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 NIT2Q9NQR4 276 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 RASL12Q9NYN1 266 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 RIC1Q4ADV7 1423 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 MCM3APO60318 1980 aa0.1□□□□□ -2.39
SMAD1-203ENST00000502342 GOLGA6L19H0YKK7 550 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 PFDN6O15212 129 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 SNRNP200O75643 2136 aaKnown RBP0.09□□□□□ -2.4
SMAD1-203ENST00000502342 TYMSP04818 313 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 CTSDP07339 412 aaPredicted RBP0.09□□□□□ -2.4
SMAD1-203ENST00000502342 ZNF25P17030 456 aaPredicted RBP0.09□□□□□ -2.4
SMAD1-203ENST00000502342 SSR2P43308 183 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 RHOGP84095 191 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 SPANXN3Q5MJ09 141 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 PFN4Q8NHR9 129 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 TMEM70Q9BUB7 260 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 CDC42SE1Q9NRR8 79 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 TAS2R4Q9NYW5 299 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 CACNA1EQ15878 2313 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 DENND4CQ5VZ89 1909 aa0.09□□□□□ -2.4
SMAD1-203ENST00000502342 KCPQ6ZWJ8 1503 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 FABP12A6NFH5 140 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 HSBP1L1C9JCN9 74 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 INE1O15225 51 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 ACOX3O15254 700 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 UBL3O95164 117 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 DNAL4O96015 105 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 UCHL3P15374 230 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 HIST1H2BOP23527 126 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 RPL12P30050 165 aaKnown RBP0.08□□□□□ -2.4
SMAD1-203ENST00000502342 HIST1H2BBP33778 126 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 HIST1H2BDP58876 126 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 HIST1H2BCP62807 126 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 HIST2H2BEQ16778 126 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 MPV17LQ2QL34 196 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 RNASE10Q5GAN6 216 aaKnown RBP0.08□□□□□ -2.4
SMAD1-203ENST00000502342 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.08□□□□□ -2.4
SMAD1-203ENST00000502342 C1orf195Q5TG92 126 aa0.08□□□□□ -2.4
SMAD1-203ENST00000502342 RPL22L1Q6P5R6 122 aaKnown RBP0.08□□□□□ -2.4
SMAD1-203ENST00000502342 CLVS1Q8IUQ0 354 aaPredicted RBP0.08□□□□□ -2.4
SMAD1-203ENST00000502342 DEFB125Q8N687 156 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms