RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 NUDCD2Q8WVJ2 157 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 ATP6V0BQ99437 205 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 GINS3Q9BRX5 216 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 MS4A6AQ9H2W1 248 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 PLCXD1Q9NUJ7 323 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 TBC1D24Q9ULP9 559 aa8.43□□□□□ -1.06
CDK9-205ENST00000498339 LSM2Q9Y333 95 aaKnown RBP8.43□□□□□ -1.06
CDK9-205ENST00000498339 IGHV3-66A0A0C4DH42 116 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 F8W735 103 aaPredicted RBP8.42□□□□□ -1.06
CDK9-205ENST00000498339 K7EIM0 57 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 PDCD5O14737 125 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 HPRT1P00492 218 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 SPP1P10451 314 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 RAB6AP20340 208 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 C4BPBP20851 252 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 PSMA1P25786 263 aaKnown RBP8.42□□□□□ -1.06
CDK9-205ENST00000498339 OR10A3P58181 314 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 GNG2P59768 71 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 ARPC4P59998 168 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 FAM90A2PQ658T7 463 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 MORN3Q6PF18 240 aaPredicted RBP8.42□□□□□ -1.06
CDK9-205ENST00000498339 FAM24BQ8N5W8 94 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 OR13F1Q8NGS4 319 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 OR51H1Q8NH63 302 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 ST8SIA2Q92186 375 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 LSM10Q969L4 123 aaKnown RBP8.42□□□□□ -1.06
CDK9-205ENST00000498339 MISP3Q96FF7 219 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 SCRT1Q9BWW7 348 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 CCL28Q9NRJ3 127 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 TMEM14BQ9NUH8 114 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 FKBP14Q9NWM8 211 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 X6R8D5 127 aa8.42□□□□□ -1.06
CDK9-205ENST00000498339 NACAE9PAV3 2078 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 ZNF705EA8MWA4 302 aaPredicted RBP8.41□□□□□ -1.06
CDK9-205ENST00000498339 CD5P06127 495 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 CTSGP08311 255 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 NPY1RP25929 384 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 FXYD4P59646 89 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 FABP5Q01469 135 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 C12orf74Q32Q52 190 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 CDNFQ49AH0 187 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 C1orf134Q5TEV5 83 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 AADACL3Q5VUY0 350 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 ZNF773Q6PK81 442 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 Q6ZRM9 215 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 TRPT1Q86TN4 253 aaKnown RBP8.41□□□□□ -1.06
CDK9-205ENST00000498339 SLC25A46Q96AG3 418 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 OR10C1Q96KK4 312 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 CCDC90BQ9GZT6 254 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 ANXA10Q9UJ72 324 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 LRP1BQ9NZR2 4599 aa8.41□□□□□ -1.06
CDK9-205ENST00000498339 TEX50A0A1B0GTY4 177 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 TMEM235A6NFC5 223 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 KNCNA6PVL3 124 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 RBFOX2O43251 390 aaKnown RBP eCLIP8.4□□□□□ -1.06
CDK9-205ENST00000498339 GNG7O60262 68 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 CDK2AP2O75956 126 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 MYL9P24844 172 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 FCGR2CP31995 323 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 MFAP4P55083 255 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 HACD4Q5VWC8 232 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 STXBP6Q8NFX7 210 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 DGCR14Q96DF8 476 aaKnown RBP8.4□□□□□ -1.06
CDK9-205ENST00000498339 ZNF414Q96IQ9 312 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 SLC5A7Q9GZV3 580 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 DCSTAMPQ9H295 470 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 OR51B2Q9Y5P1 312 aa8.4□□□□□ -1.06
CDK9-205ENST00000498339 IFITM5A6NNB3 132 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 MARCH11A6NNE9 402 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 IGHV3-48P01763 117 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 GIG44P09565 113 aaPredicted RBP8.39□□□□□ -1.07
CDK9-205ENST00000498339 ZNF688P0C7X2 276 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 RCN1Q15293 331 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 POU2AF1Q16633 256 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 ACTL10Q5JWF8 245 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 UBE2UQ5VVX9 321 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 TMEM17Q86X19 198 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 PACRGLQ8N7B6 248 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 ZBTB34Q8NCN2 500 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 DUSP18Q8NEJ0 188 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 TSPAN14Q8NG11 270 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 PINX1Q96BK5 328 aaKnown RBP8.39□□□□□ -1.07
CDK9-205ENST00000498339 TMEM56Q96MV1 263 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 NXF2Q9GZY0 626 aaKnown RBP8.39□□□□□ -1.07
CDK9-205ENST00000498339 TMEM231Q9H6L2 316 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 PLEKHA2Q9HB19 425 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 ACOT13Q9NPJ3 140 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 C8orf4Q9NR00 106 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 SCN3BQ9NY72 215 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 COMMD9Q9P000 198 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 NSG2Q9Y328 171 aa8.39□□□□□ -1.07
CDK9-205ENST00000498339 TRAV2A0A0B4J234 112 aa8.38□□□□□ -1.07
CDK9-205ENST00000498339 SNAPC5O75971 98 aa8.38□□□□□ -1.07
CDK9-205ENST00000498339 PPYP01298 95 aa8.38□□□□□ -1.07
CDK9-205ENST00000498339 APOHP02749 345 aaPredicted RBP8.38□□□□□ -1.07
CDK9-205ENST00000498339 FGF2P09038 288 aa8.38□□□□□ -1.07
CDK9-205ENST00000498339 PTHLHP12272 177 aa8.38□□□□□ -1.07
CDK9-205ENST00000498339 EMP1P54849 157 aa8.38□□□□□ -1.07
CDK9-205ENST00000498339 MSMO1Q15800 293 aa8.38□□□□□ -1.07
CDK9-205ENST00000498339 Q6ZR54 194 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms