RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	TPT1	P13693	172 aa	Known RBP	4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	PAX1	P15863	534 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	PRTN3	P24158	256 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	PAX6	P26367	422 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	CEACAM3	P40198	252 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	RAB13	P51153	203 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	CAV2	P51636	162 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	ZNF137P	P52743	207 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	ATP5J2	P56134	94 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	LGALS4	P56470	323 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	BRWD1-AS2	P59051	145 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	UBE2K	P61086	200 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	RPP30	P78346	268 aa	Known RBP	4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	BAX	Q07812	192 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	POU2AF1	Q16633	256 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	HLA-DRB5	Q30154	266 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	MIDN	Q504T8	468 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	STX12	Q86Y82	276 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	PDPN	Q86YL7	162 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	BAP18	Q8IXM2	172 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	C11orf42	Q8N5U0	333 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	ZNF525	Q8N782	197 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	ZNF383	Q8NA42	475 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	OR52E5	Q8NH55	327 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	CLDND2	Q8NHS1	167 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	VSTM2A	Q8TAG5	236 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	STOML3	Q8TAV4	291 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	PCNP	Q8WW12	178 aa	Known RBP	4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	DPF1	Q92782	380 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	LHX4	Q969G2	390 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	ST6GALNAC6	Q969X2	333 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	FLYWCH2	Q96CP2	140 aa	Known RBP	4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	NARS2	Q96I59	477 aa	Known RBP	4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	SMIM8	Q96KF7	97 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	CIB3	Q96Q77	187 aa	Predicted RBP	4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	NABP2	Q9BQ15	211 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	TCEAL7	Q9BRU2	100 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	MAGT1	Q9H0U3	335 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	FKBP11	Q9NYL4	201 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	PSENEN	Q9NZ42	101 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	HSPB7	Q9UBY9	170 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	INSIG2	Q9Y5U4	225 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	KPTN	Q9Y664	436 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	WSB1	Q9Y6I7	421 aa		4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	YLPM1	P49750	1951 aa	Known RBP	4.27	□□□□□ -1.73
HMGXB4-208	ENST00000498325	TMEM218	A2RU14	115 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	FAM24A	A6NFZ4	105 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	MSGN1	A6NI15	193 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	CEBPZOS	A8MTT3	80 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325		F8W036	122 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	BUB1B-PAK6	H3BSN5	160 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	DFFB	O76075	338 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	IFNA17	P01571	189 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	IGLV1-47	P01700	117 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	S100A8	P05109	93 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325		P0C879	139 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	SMIM6	P0DI80	62 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	SLC25A16	P16260	332 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	COX7A1	P24310	79 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	HTR1D	P28221	377 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	LGALS7	P47929	136 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	LINC00205	P59089	165 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	SPCS3	P61009	180 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	LMO4	P61968	165 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	RPS16	P62249	146 aa	Known RBP	4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	HBG1	P69891	147 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	HBG2	P69892	147 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	DEFA5	Q01523	94 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	TNFRSF9	Q07011	255 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	ZNF266	Q14584	549 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	GUCA2B	Q16661	112 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	IZUMO4	Q1ZYL8	232 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	C10orf91	Q5T1B1	145 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	UTF1	Q5T230	341 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	C12orf54	Q6X4T0	127 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	IL34	Q6ZMJ4	242 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	SSX9	Q7RTT3	188 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	PNKD	Q8N490	385 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	TMEM252	Q8N6L7	170 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325		Q8N7P7	452 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	OR11H6	Q8NGC7	330 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	OR4C13	Q8NGP0	309 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	OR4A5	Q8NH83	315 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	SGMS2	Q8NHU3	365 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	DTD1	Q8TEA8	209 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	C10orf105	Q8TEF2	133 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	RPE	Q96AT9	228 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	TSNAX	Q99598	290 aa	Known RBP	4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	BPESC1	Q9GZL8	116 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	HIPK2	Q9H2X6	1198 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	RBKS	Q9H477	322 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	SAV1	Q9H4B6	383 aa	Predicted RBP	4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	C11orf1	Q9H5F2	150 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	UNKL	Q9H9P5	680 aa	Known RBP	4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	ENY2	Q9NPA8	101 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	CYTL1	Q9NRR1	136 aa		4.26	□□□□□ -1.73
HMGXB4-208	ENST00000498325	LYRM2	Q9NU23	88 aa	Predicted RBP	4.26	□□□□□ -1.73

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