RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 KRBOX1C9JBD0 128 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 INS-IGF2F8WCM5 200 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 AGPAT2O15120 278 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 NPFFO15130 113 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 NDUFA3O95167 84 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 HBE1P02100 147 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 CRYGBP07316 175 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 MSMBP08118 114 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 TMEM11P17152 192 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 PAX6P26367 422 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 COMPP49747 757 aaPredicted RBP6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 ATP5IP56385 69 aaPredicted RBP6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 SERF2P84101 59 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 BSXQ3C1V8 233 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 ACSM6Q6P461 480 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 SLC16A13Q7RTY0 426 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 PPP1R27Q86WC6 154 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 CCDC28AQ8IWP9 274 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 DYNAPQ8N1N2 210 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 OR2T10Q8NGZ9 312 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 ABHD5Q8WTS1 349 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 SRSF12Q8WXF0 261 aaKnown RBP6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 RCC1LQ96I51 464 aaKnown RBP6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 RITA1Q96K30 269 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 SLC35E1Q96K37 410 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 GGTLC1Q9BX51 225 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 TMEM231Q9H6L2 316 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 SLC25A22Q9H936 323 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 TREM1Q9NP99 234 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 BEX4Q9NWD9 120 aaPredicted RBP6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 SPG11Q96JI7 2443 aa6.47□□□□□ -1.37
PDZRN3-212ENST00000498048 A0A1B0GW64 132 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 IGLC7A0M8Q6 106 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 MAP1LC3B2A6NCE7 125 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 BTBD17A6NE02 478 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 FNDC10F2Z333 226 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 SOX15O60248 233 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 MBP02144 154 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 REG1AP05451 166 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 H2AFB1P0C5Y9 115 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 OR13C7P0DN81 318 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 SUB1P53999 127 aaKnown RBP eCLIP6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 WT1-ASQ06250 92 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 MRGPRG-AS1Q2M3A8 158 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 RUSC1-AS1Q66K80 236 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 FAM122CQ6P4D5 195 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 ZNF114Q8NC26 417 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 BPIFCQ8NFQ6 507 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 LYPD6BQ8NI32 183 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 C17orf50Q8WW18 174 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 EAF1Q96JC9 268 aaPredicted RBP6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 MGST2Q99735 147 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 PBDC1Q9BVG4 233 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 MAP1LC3BQ9GZQ8 125 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 VSIRQ9H7M9 311 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 FAM96BQ9Y3D0 163 aa6.46□□□□□ -1.38
PDZRN3-212ENST00000498048 USP9YO00507 2555 aaPredicted RBP6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 IGHV3OR16-10A0A075B7F0 116 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 TRAV20A0A0B4J274 112 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 IGHV1-69DA0A0B4J2H0 117 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 CTXND1A0A1B0GTU2 59 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 E7EUB6 86 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 IGHV1-69P01742 117 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 RPLP1P05386 114 aaKnown RBP6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 APELAP0DMC3 54 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 MDKP21741 143 aaPredicted RBP6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 CD24P25063 80 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 BRS3P32247 399 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 OPRK1P41145 380 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 CDC34P49427 236 aaPredicted RBP6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 KRTAP10-9P60411 292 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 PAX8Q06710 450 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 CD69Q07108 199 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 GUK1Q16774 197 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 C5orf64Q2M2E5 130 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 ACOT6Q3I5F7 207 aaPredicted RBP6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 FBLN7Q53RD9 439 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 Q5PR19 223 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 TEPPQ6URK8 271 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 SSX7Q7RTT5 188 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 CENPVQ7Z7K6 275 aaPredicted RBP6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 NPBQ8NG41 125 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 RNASEH2CQ8TDP1 164 aaKnown RBP6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 C22orf15Q8WYQ4 148 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 MALSU1Q96EH3 234 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 P2RX4Q99571 388 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 RPRMQ9NS64 109 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 PXMP4Q9Y6I8 212 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 CRYBG3Q68DQ2 2970 aa6.45□□□□□ -1.38
PDZRN3-212ENST00000498048 CHD6Q8TD26 2715 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 CENPVL3A0A0U1RRI6 287 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 B4DSR2 109 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 TEX22C9J3V5 150 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 CORTO00230 105 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 CNIH1O95406 144 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 IFNA1P01562 189 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 AREGP15514 252 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 M6PRP20645 277 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 PPT1P50897 306 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 B2MP61769 119 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms