RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RAB8BQ92930 207 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 DERL1Q9BUN8 251 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 OR51I1Q9H343 314 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 XPNPEP1Q9NQW7 623 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 TP73-AS1Q9UF72 201 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 DCCP43146 1447 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 POLEQ07864 2286 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 LOC110117498A0A087WWA1 95 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 TRBV6-7A0A0A0MS04 114 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 IGKV1-5P01602 117 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 CRYGAP11844 174 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 MYL12AP19105 171 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 MAGEA2P43356 314 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 DMTNQ08495 405 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 GRK1Q15835 563 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 FAM151BQ6UXP7 276 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 OR51D1Q8NGF3 324 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 PFN4Q8NHR9 129 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 RASSF5Q8WWW0 418 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 TMEM106AQ96A25 262 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 CFAP53Q96M91 514 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 WDR61Q9GZS3 305 aaKnown RBP0.34□□□□□ -2.36
SMC4-227ENST00000497984 FAM96AQ9H5X1 160 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 FGFR1OP2Q9NVK5 253 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 EVC2Q86UK5 1308 aa0.34□□□□□ -2.36
SMC4-227ENST00000497984 CPAMD8Q8IZJ3 1885 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 A0A087WX48 190 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 A0A0A6YYH2 397 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 A6NJ64 397 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 FADS1O60427 444 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 OR5F1O95221 314 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 DEXIO95424 95 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 APOEP02649 317 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 ASAH2BP0C7U1 165 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 OCM2P0CE71 109 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 UCHL3P15374 230 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 SPI1P17947 270 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 ZNF93P35789 620 aaPredicted RBP0.33□□□□□ -2.36
SMC4-227ENST00000497984 RAB5BP61020 215 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 STX5Q13190 355 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 PMAIP1Q13794 54 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 Q6ZS49 121 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 MRPL57Q9BQC6 102 aaKnown RBP0.33□□□□□ -2.36
SMC4-227ENST00000497984 LLPHQ9BRT6 129 aaKnown RBP0.33□□□□□ -2.36
SMC4-227ENST00000497984 SLC50A1Q9BRV3 221 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 DRC3Q9H069 523 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 CMTM6Q9NX76 183 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 ZFP30Q9Y2G7 519 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 MYH11P35749 1972 aa0.33□□□□□ -2.36
SMC4-227ENST00000497984 EIF4G1Q04637 1599 aaKnown RBP0.32□□□□□ -2.36
SMC4-227ENST00000497984 FUOMA2VDF0 154 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 C2orf70A6NJV1 201 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 LRRN3E7EW58 273 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 SLC16A4O15374 487 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 HTR1AP08908 422 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 HIST1H2BOP23527 126 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 BRS3P32247 399 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 HIST1H2BBP33778 126 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 TCL1AP56279 114 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 HIST1H2BDP58876 126 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 HIST1H2BCP62807 126 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 IFITM2Q01629 132 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 HIST2H2BEQ16778 126 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.32□□□□□ -2.36
SMC4-227ENST00000497984 CD200R1LQ6Q8B3 271 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 BPIFA4PQ86YQ2 179 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 LINC00311Q8N616 119 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 HIST1H2BHQ93079 126 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 HIST1H2BNQ99877 126 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 HIST1H2BMQ99879 126 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 CKLFQ9UBR5 152 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 PTPRBP23467 1997 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 PCDH15Q96QU1 1955 aa0.32□□□□□ -2.36
SMC4-227ENST00000497984 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.31□□□□□ -2.36
SMC4-227ENST00000497984 PDE6HQ13956 83 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 SPANXN3Q5MJ09 141 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 OGFRL1Q5TC84 451 aaPredicted RBP0.31□□□□□ -2.36
SMC4-227ENST00000497984 LPCAT4Q643R3 524 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 CLVS1Q8IUQ0 354 aaPredicted RBP0.31□□□□□ -2.36
SMC4-227ENST00000497984 IQCF2Q8IXL9 164 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 C1orf158Q8N1D5 194 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 TMEM86BQ8N661 226 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 TERB2Q8NHR7 220 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 MRPL30Q8TCC3 161 aaKnown RBP0.31□□□□□ -2.36
SMC4-227ENST00000497984 ZNF418Q8TF45 676 aaPredicted RBP0.31□□□□□ -2.36
SMC4-227ENST00000497984 SCGB3A1Q96QR1 104 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 ATP6V1DQ9Y5K8 247 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 LAMB4A4D0S4 1761 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 MYOFQ9NZM1 2061 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 PIK3R4Q99570 1358 aa0.31□□□□□ -2.36
SMC4-227ENST00000497984 TRAV1-1A0A0B4J248 108 aa0.3□□□□□ -2.36
SMC4-227ENST00000497984 EEF1E1-BLOC1S5C9J1V9 151 aa0.3□□□□□ -2.36
SMC4-227ENST00000497984 OR2T1O43869 369 aa0.3□□□□□ -2.36
SMC4-227ENST00000497984 OR1I1O60431 355 aa0.3□□□□□ -2.36
SMC4-227ENST00000497984 OR5G3P0C626 314 aa0.3□□□□□ -2.36
SMC4-227ENST00000497984 HBA1P69905 142 aa0.3□□□□□ -2.36
SMC4-227ENST00000497984 RPL22L1Q6P5R6 122 aaKnown RBP0.3□□□□□ -2.36
SMC4-227ENST00000497984 DEFB128Q7Z7B8 93 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms