RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 HOXA1P49639 335 aaPredicted RBP15.64■□□□□ 0.09
CTSD-206ENST00000497544 RAB9AP51151 201 aa15.64■□□□□ 0.09
CTSD-206ENST00000497544 SRSF4Q08170 494 aaKnown RBP15.64■□□□□ 0.09
CTSD-206ENST00000497544 IAH1Q2TAA2 248 aaPredicted RBP15.64■□□□□ 0.09
CTSD-206ENST00000497544 GSG1LQ6UXU4 331 aa15.64■□□□□ 0.09
CTSD-206ENST00000497544 GSKIPQ9P0R6 139 aa15.64■□□□□ 0.09
CTSD-206ENST00000497544 C7orf66A4D0T2 115 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 TRGV3P03979 118 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 CRYGCP07315 174 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 CTRB1P17538 263 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 CD83Q01151 205 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 WT1-ASQ06250 92 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 TNFRSF9Q07011 255 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 KHDC1LQ5JSQ8 128 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 CTRB2Q6GPI1 263 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 OR2C3Q8N628 320 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 OR10C1Q96KK4 312 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 KLK15Q9H2R5 256 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 HSPB7Q9UBY9 170 aa15.63■□□□□ 0.09
CTSD-206ENST00000497544 FAM90A26D6RGX4 464 aa15.62■□□□□ 0.09
CTSD-206ENST00000497544 CYB5BO43169 146 aa15.62■□□□□ 0.09
CTSD-206ENST00000497544 MED6O75586 246 aa15.62■□□□□ 0.09
CTSD-206ENST00000497544 TCTEX1D4Q5JR98 221 aa15.62■□□□□ 0.09
CTSD-206ENST00000497544 LCNL1Q6ZST4 164 aa15.62■□□□□ 0.09
CTSD-206ENST00000497544 ZBTB8BQ8NAP8 495 aaPredicted RBP15.62■□□□□ 0.09
CTSD-206ENST00000497544 C2orf50Q96LR7 162 aa15.62■□□□□ 0.09
CTSD-206ENST00000497544 CITED1Q99966 193 aa15.62■□□□□ 0.09
CTSD-206ENST00000497544 CITED2Q99967 270 aaPredicted RBP15.62■□□□□ 0.09
CTSD-206ENST00000497544 HIPK2Q9H2X6 1198 aa15.62■□□□□ 0.09
CTSD-206ENST00000497544 SLA2Q9H6Q3 261 aa15.62■□□□□ 0.09
CTSD-206ENST00000497544 HEYLQ9NQ87 328 aaPredicted RBP15.62■□□□□ 0.09
CTSD-206ENST00000497544 ZFP57Q9NU63 452 aa15.62■□□□□ 0.09
CTSD-206ENST00000497544 GOSR2O14653 212 aa15.61■□□□□ 0.09
CTSD-206ENST00000497544 PRH1P02810 166 aa15.61■□□□□ 0.09
CTSD-206ENST00000497544 RPLP1P05386 114 aaKnown RBP15.61■□□□□ 0.09
CTSD-206ENST00000497544 SNCAP37840 140 aa15.61■□□□□ 0.09
CTSD-206ENST00000497544 NKX2-1P43699 371 aaPredicted RBP15.61■□□□□ 0.09
CTSD-206ENST00000497544 TPPP2P59282 170 aa15.61■□□□□ 0.09
CTSD-206ENST00000497544 C2orf68Q2NKX9 166 aa15.61■□□□□ 0.09
CTSD-206ENST00000497544 RNF152Q8N8N0 203 aa15.61■□□□□ 0.09
CTSD-206ENST00000497544 RBKSQ9H477 322 aa15.61■□□□□ 0.09
CTSD-206ENST00000497544 TSSC4Q9Y5U2 329 aaPredicted RBP15.61■□□□□ 0.09
CTSD-206ENST00000497544 INS-IGF2F8WCM5 200 aa15.6■□□□□ 0.09
CTSD-206ENST00000497544 WRBO00258 174 aa15.6■□□□□ 0.09
CTSD-206ENST00000497544 BRI3O95415 125 aa15.6■□□□□ 0.09
CTSD-206ENST00000497544 HIST1H1BP16401 226 aaKnown RBP15.6■□□□□ 0.09
CTSD-206ENST00000497544 ID3Q02535 119 aa15.6■□□□□ 0.09
CTSD-206ENST00000497544 SLC25A24Q6NUK1 477 aa15.6■□□□□ 0.09
CTSD-206ENST00000497544 OR4D5Q8NGN0 318 aa15.6■□□□□ 0.09
CTSD-206ENST00000497544 OR1L6Q8NGR2 347 aa15.6■□□□□ 0.09
CTSD-206ENST00000497544 F11RQ9Y624 299 aaKnown RBP15.6■□□□□ 0.09
CTSD-206ENST00000497544 SCGB1D2O95969 90 aa15.59■□□□□ 0.09
CTSD-206ENST00000497544 SUB1P53999 127 aaKnown RBP eCLIP15.59■□□□□ 0.09
CTSD-206ENST00000497544 C19orf35Q6ZS72 473 aa15.59■□□□□ 0.09
CTSD-206ENST00000497544 ZNF491Q8N8L2 437 aa15.59■□□□□ 0.09
CTSD-206ENST00000497544 DTD1Q8TEA8 209 aa15.59■□□□□ 0.09
CTSD-206ENST00000497544 MAGT1Q9H0U3 335 aa15.59■□□□□ 0.09
CTSD-206ENST00000497544 MED28Q9H204 178 aa15.59■□□□□ 0.09
CTSD-206ENST00000497544 THYN1Q9P016 225 aa15.59■□□□□ 0.09
CTSD-206ENST00000497544 A0A0G2JLM5 398 aa15.58■□□□□ 0.08
CTSD-206ENST00000497544 SYNGR2O43760 224 aa15.58■□□□□ 0.08
CTSD-206ENST00000497544 SIX6O95475 246 aa15.58■□□□□ 0.08
CTSD-206ENST00000497544 RHOGP84095 191 aa15.58■□□□□ 0.08
CTSD-206ENST00000497544 NDUFA11Q86Y39 141 aa15.58■□□□□ 0.08
CTSD-206ENST00000497544 OR1P1Q8NH06 330 aa15.58■□□□□ 0.08
CTSD-206ENST00000497544 FANCD2OSQ96PS1 177 aa15.58■□□□□ 0.08
CTSD-206ENST00000497544 P2RX4Q99571 388 aa15.58■□□□□ 0.08
CTSD-206ENST00000497544 MGAT4CQ9UBM8 478 aa15.58■□□□□ 0.08
CTSD-206ENST00000497544 FBXL7Q9UJT9 491 aa15.58■□□□□ 0.08
CTSD-206ENST00000497544 TRBV9A0A0B4J1U6 114 aa15.57■□□□□ 0.08
CTSD-206ENST00000497544 A0A1W2PRX2 142 aa15.57■□□□□ 0.08
CTSD-206ENST00000497544 NUDT19A8MXV4 375 aa15.57■□□□□ 0.08
CTSD-206ENST00000497544 OR2J3O76001 311 aa15.57■□□□□ 0.08
CTSD-206ENST00000497544 HTR2BP41595 481 aa15.57■□□□□ 0.08
CTSD-206ENST00000497544 CDX1P47902 265 aaPredicted RBP15.57■□□□□ 0.08
CTSD-206ENST00000497544 RPL23AP62750 156 aaKnown RBP15.57■□□□□ 0.08
CTSD-206ENST00000497544 CYCSP99999 105 aaKnown RBP15.57■□□□□ 0.08
CTSD-206ENST00000497544 NSUN5P1Q3KNT7 163 aa15.57■□□□□ 0.08
CTSD-206ENST00000497544 NECAP1Q8NC96 275 aa15.57■□□□□ 0.08
CTSD-206ENST00000497544 USMG5Q96IX5 58 aa15.57■□□□□ 0.08
CTSD-206ENST00000497544 UBE2E2Q96LR5 201 aa15.57■□□□□ 0.08
CTSD-206ENST00000497544 CIB3Q96Q77 187 aaPredicted RBP15.57■□□□□ 0.08
CTSD-206ENST00000497544 FAM223BA6NKX1 122 aa15.56■□□□□ 0.08
CTSD-206ENST00000497544 IFNA10P01566 189 aa15.56■□□□□ 0.08
CTSD-206ENST00000497544 IAPPP10997 89 aa15.56■□□□□ 0.08
CTSD-206ENST00000497544 POLR2GP62487 172 aaKnown RBP eCLIP15.56■□□□□ 0.08
CTSD-206ENST00000497544 ATP5G2Q06055 141 aa15.56■□□□□ 0.08
CTSD-206ENST00000497544 KIAA0141Q14154 515 aaPredicted RBP15.56■□□□□ 0.08
CTSD-206ENST00000497544 NOXA1Q86UR1 476 aa15.56■□□□□ 0.08
CTSD-206ENST00000497544 FAM223AQ8IWN6 122 aa15.56■□□□□ 0.08
CTSD-206ENST00000497544 ZNF114Q8NC26 417 aa15.56■□□□□ 0.08
CTSD-206ENST00000497544 MYOZ3Q8TDC0 251 aa15.56■□□□□ 0.08
CTSD-206ENST00000497544 U3KQ87 197 aa15.56■□□□□ 0.08
CTSD-206ENST00000497544 IGLV11-55A0A075B6I3 123 aa15.55■□□□□ 0.08
CTSD-206ENST00000497544 NDUFB8O95169 186 aa15.55■□□□□ 0.08
CTSD-206ENST00000497544 LY86O95711 162 aa15.55■□□□□ 0.08
CTSD-206ENST00000497544 MBPP02686 304 aaPredicted RBP15.55■□□□□ 0.08
CTSD-206ENST00000497544 RNASE2P10153 161 aaKnown RBP15.55■□□□□ 0.08
CTSD-206ENST00000497544 DEFA5Q01523 94 aa15.55■□□□□ 0.08
CTSD-206ENST00000497544 KLK9Q2XQG4 91 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms