RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 CLVS1Q8IUQ0 354 aaPredicted RBP12.8□□□□□ -0.36
SMC4-226ENST00000497311 CADM3Q8N126 398 aa12.8□□□□□ -0.36
SMC4-226ENST00000497311 RAB2BQ8WUD1 216 aa12.8□□□□□ -0.36
SMC4-226ENST00000497311 DAZ1Q9NQZ3 744 aaKnown RBP12.8□□□□□ -0.36
SMC4-226ENST00000497311 NSG2Q9Y328 171 aa12.8□□□□□ -0.36
SMC4-226ENST00000497311 IGHV3-21A0A0B4J1V1 117 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 TMBIM6P55061 237 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 SPCS2Q15005 226 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 LAMTOR1Q6IAA8 161 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 TMEM56Q96MV1 263 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 SPAG8Q99932 426 aaPredicted RBP12.79□□□□□ -0.36
SMC4-226ENST00000497311 BCL7BQ9BQE9 202 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 OVOL2Q9BRP0 275 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 FXYD6Q9H0Q3 95 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 FKBP11Q9NYL4 201 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 C21orf62Q9NYP8 219 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 PRNDQ9UKY0 176 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 ALMS1Q8TCU4 4167 aa12.79□□□□□ -0.36
SMC4-226ENST00000497311 NDUFA4O00483 81 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 TSPAN4O14817 238 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 HLA-DMAP28067 261 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 HRH1P35367 487 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 MFAP2P55001 183 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 LYSMD2Q8IV50 215 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 UBAC2Q8NBM4 344 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 OR5B3Q8NH48 314 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 GPX8Q8TED1 209 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 SCARB1Q8WTV0 552 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 TSC22D3Q99576 134 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 CHRDL1Q9BU40 450 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 SCPEP1Q9HB40 452 aa12.78□□□□□ -0.36
SMC4-226ENST00000497311 FAM25AB3EWG3 89 aa12.77□□□□□ -0.37
SMC4-226ENST00000497311 FAM25CB3EWG5 89 aa12.77□□□□□ -0.37
SMC4-226ENST00000497311 FAM25GB3EWG6 89 aa12.77□□□□□ -0.37
SMC4-226ENST00000497311 S100GP29377 79 aa12.77□□□□□ -0.37
SMC4-226ENST00000497311 TSPAN5P62079 268 aa12.77□□□□□ -0.37
SMC4-226ENST00000497311 PHLDA2Q53GA4 152 aa12.77□□□□□ -0.37
SMC4-226ENST00000497311 Q56UQ5 140 aa12.77□□□□□ -0.37
SMC4-226ENST00000497311 LPCAT3Q6P1A2 487 aa12.77□□□□□ -0.37
SMC4-226ENST00000497311 C20orf24Q9BUV8 137 aa12.77□□□□□ -0.37
SMC4-226ENST00000497311 UBQLN2Q9UHD9 624 aa12.77□□□□□ -0.37
SMC4-226ENST00000497311 K7EIM0 57 aa12.76□□□□□ -0.37
SMC4-226ENST00000497311 APOC4P55056 127 aa12.76□□□□□ -0.37
SMC4-226ENST00000497311 SNX29P2Q8IUI4 249 aa12.76□□□□□ -0.37
SMC4-226ENST00000497311 FAM212BQ9NTI7 297 aaPredicted RBP12.76□□□□□ -0.37
SMC4-226ENST00000497311 TMEM14BQ9NUH8 114 aa12.76□□□□□ -0.37
SMC4-226ENST00000497311 C15orf61A6NNL5 157 aa12.75□□□□□ -0.37
SMC4-226ENST00000497311 F8W735 103 aaPredicted RBP12.75□□□□□ -0.37
SMC4-226ENST00000497311 K7EMT4 169 aa12.75□□□□□ -0.37
SMC4-226ENST00000497311 ADMP35318 185 aa12.75□□□□□ -0.37
SMC4-226ENST00000497311 OR1P1Q8NH06 330 aa12.75□□□□□ -0.37
SMC4-226ENST00000497311 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
SMC4-226ENST00000497311 BIRC6Q9NR09 4857 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 IGHV3OR16-8A0A075B7F1 116 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 OR4C46A6NHA9 309 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 DBX1A6NMT0 343 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 C15orf62A8K5M9 175 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 ZNF207O43670 478 aaKnown RBP12.74□□□□□ -0.37
SMC4-226ENST00000497311 NOL3O60936 208 aaKnown RBP12.74□□□□□ -0.37
SMC4-226ENST00000497311 CTSGP08311 255 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 Q6ZWC4 215 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 TBC1D26Q86UD7 250 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 WFDC3Q8IUB2 231 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 OR4A16Q8NH70 328 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 MIXL1Q9H2W2 232 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 CCDC59Q9P031 241 aaKnown RBP12.74□□□□□ -0.37
SMC4-226ENST00000497311 EXTL2Q9UBQ6 330 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 TP53TG1Q9Y2A0 90 aa12.74□□□□□ -0.37
SMC4-226ENST00000497311 UBE2CO00762 179 aa12.73□□□□□ -0.37
SMC4-226ENST00000497311 NUPL2O15504 423 aaKnown RBP12.73□□□□□ -0.37
SMC4-226ENST00000497311 SPRY2O43597 315 aa12.73□□□□□ -0.37
SMC4-226ENST00000497311 BMI1P35226 326 aa12.73□□□□□ -0.37
SMC4-226ENST00000497311 RCVRNP35243 200 aa12.73□□□□□ -0.37
SMC4-226ENST00000497311 RELQ04864 619 aaPredicted RBP12.73□□□□□ -0.37
SMC4-226ENST00000497311 ODF3L2Q3SX64 289 aa12.73□□□□□ -0.37
SMC4-226ENST00000497311 H2BFWTQ7Z2G1 175 aa12.73□□□□□ -0.37
SMC4-226ENST00000497311 C15orf40Q8WUR7 153 aa12.73□□□□□ -0.37
SMC4-226ENST00000497311 MISP3Q96FF7 219 aa12.73□□□□□ -0.37
SMC4-226ENST00000497311 SEC22AQ96IW7 307 aa12.73□□□□□ -0.37
SMC4-226ENST00000497311 KIR2DL5BA0A0G2JN68 375 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 KIR2DL5BA0A0G2JPC4 375 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 A0A0J9YWU9 116 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 H3BMQ9 156 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 CTDSP2O14595 271 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 RGS5O15539 181 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 CTSDP07339 412 aaPredicted RBP12.72□□□□□ -0.37
SMC4-226ENST00000497311 MFAP4P55083 255 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 UCP3P55916 312 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 DEFB135Q30KP9 77 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 KIR2DL5AQ8N109 375 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 STPG3Q8N7X2 389 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 KIR2DL5BQ8NHK3 375 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 ABHD1Q96SE0 405 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 SMPXQ9UHP9 88 aa12.72□□□□□ -0.37
SMC4-226ENST00000497311 CXorf65A6NEN9 183 aa12.71□□□□□ -0.37
SMC4-226ENST00000497311 YIF1AO95070 293 aa12.71□□□□□ -0.37
SMC4-226ENST00000497311 IGKV1-39P01597 117 aa12.71□□□□□ -0.37
SMC4-226ENST00000497311 IGKV1D-39P04432 117 aa12.71□□□□□ -0.37
SMC4-226ENST00000497311 FCGR2BP31994 310 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms