RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 Q6ZRG5 221 aa6.88□□□□□ -1.31
U2AF1-212ENST00000496462 LRTM2Q8N967 370 aa6.88□□□□□ -1.31
U2AF1-212ENST00000496462 Q8N9W7 124 aa6.88□□□□□ -1.31
U2AF1-212ENST00000496462 RNASEH2CQ8TDP1 164 aaKnown RBP6.88□□□□□ -1.31
U2AF1-212ENST00000496462 SEC22AQ96IW7 307 aa6.88□□□□□ -1.31
U2AF1-212ENST00000496462 ATP6V0E1O15342 81 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 TNFRSF9Q07011 255 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 HABP2Q14520 560 aaPredicted RBP6.87□□□□□ -1.31
U2AF1-212ENST00000496462 OR8G2PQ6IF36 304 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 C5orf24Q7Z6I8 188 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 CFHR4Q92496 578 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 WNT10AQ9GZT5 417 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 RAMP3O60896 148 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 GIPP09681 153 aaPredicted RBP6.87□□□□□ -1.31
U2AF1-212ENST00000496462 RHOGP84095 191 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 ACY3Q96HD9 319 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 GPHA2Q96T91 129 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 MAGT1Q9H0U3 335 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 ZNF320A2RRD8 509 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 OR2J3O76001 311 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 NXPH3O95157 252 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 RRAS2P62070 204 aaPredicted RBP6.87□□□□□ -1.31
U2AF1-212ENST00000496462 KRTAP1-1Q07627 177 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 ZNF266Q14584 549 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 C1orf229Q6ZS94 237 aaPredicted RBP6.87□□□□□ -1.31
U2AF1-212ENST00000496462 ODF3L1Q8IXM7 274 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 KLHL30-AS1Q8NEE0 82 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 BPIFCQ8NFQ6 507 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 OR1P1Q8NH06 330 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 C21orf62Q9NYP8 219 aa6.87□□□□□ -1.31
U2AF1-212ENST00000496462 TRBV7-1A0A0A6YYK4 115 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 A0A1W2PRX2 142 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 SOX15O60248 233 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 ATP6V1G1O75348 118 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 CD33P20138 364 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 S100A11P31949 105 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 SPSB3Q6PJ21 355 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 Q6ZSV7 163 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 FAM103A1Q9BTL3 118 aaKnown RBP6.86□□□□□ -1.31
U2AF1-212ENST00000496462 RCL1Q9Y2P8 373 aaKnown RBP6.86□□□□□ -1.31
U2AF1-212ENST00000496462 ARHGAP32A7KAX9 2087 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 TEX50A0A1B0GTY4 177 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 HMX3A6NHT5 357 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 APELAP0DMC3 54 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 MYOD1P15172 320 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 TAS2R30P59541 319 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.86□□□□□ -1.31
U2AF1-212ENST00000496462 OR2T35Q8NGX2 323 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 WFDC12Q8WWY7 111 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 NMES1Q9C002 83 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 C16orf95Q9H693 158 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 TBC1D24Q9ULP9 559 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 NPIPB5A8MRT5 1133 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 CCSO14618 274 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 BAXQ07812 192 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 PUSL1Q8N0Z8 303 aaKnown RBP6.86□□□□□ -1.31
U2AF1-212ENST00000496462 C17orf50Q8WW18 174 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 C20orf24Q9BUV8 137 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 TANC2Q9HCD6 1990 aa6.86□□□□□ -1.31
U2AF1-212ENST00000496462 PAX6P26367 422 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 RAB9AP51151 201 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 SELENOTP62341 195 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 BLCAPP62952 87 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 PRIMA1Q86XR5 153 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 OR52B4Q8NGK2 314 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 CACNG8Q8WXS5 425 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 DDB2Q92466 427 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 LINC00527Q9UJ94 153 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 UFC1Q9Y3C8 167 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 TSC22D2O75157 780 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 GGCTO75223 188 aaKnown RBP6.85□□□□□ -1.31
U2AF1-212ENST00000496462 FAM53AQ6NSI3 398 aaPredicted RBP6.85□□□□□ -1.31
U2AF1-212ENST00000496462 ZNF329Q86UD4 541 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 NDUFA11Q86Y39 141 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 DYNAPQ8N1N2 210 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 C11orf44Q8N8P7 122 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 ZNF48Q96MX3 618 aaPredicted RBP6.85□□□□□ -1.31
U2AF1-212ENST00000496462 TXN2Q99757 166 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 TMEM147Q9BVK8 224 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 RBKSQ9H477 322 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 UQCC1Q9NVA1 299 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 ADAP1O75689 374 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 CD5P06127 495 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 ARL3P36405 182 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 RPL11P62913 178 aaKnown RBP6.85□□□□□ -1.31
U2AF1-212ENST00000496462 RELBQ01201 579 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 STOML3Q8TAV4 291 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 VN1R17PQ8TDU5 208 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 CR1P17927 2039 aa6.85□□□□□ -1.31
U2AF1-212ENST00000496462 BMPR1BO00238 502 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 GPX4P36969 197 aaPredicted RBP6.84□□□□□ -1.31
U2AF1-212ENST00000496462 CD83Q01151 205 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 ZFP69Q49AA0 526 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 SPINK9Q5DT21 86 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 OR2C3Q8N628 320 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 SMIM8Q96KF7 97 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 ZNF436Q9C0F3 470 aaPredicted RBP6.84□□□□□ -1.31
U2AF1-212ENST00000496462 SH2D7A6NKC9 451 aaPredicted RBP6.84□□□□□ -1.31
U2AF1-212ENST00000496462 MYCNOSP40205 109 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 POLR2GP62487 172 aaKnown RBP eCLIP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms