RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 IFNA6P05013 189 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 ADMP35318 185 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 RORCP51449 518 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 ELLP55199 621 aaPredicted RBP10.68□□□□□ -0.7
VTI1A-209ENST00000496445 UCP3P55916 312 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 SLC25A24Q6NUK1 477 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 LPCAT3Q6P1A2 487 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 SLC38A6Q8IZM9 456 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 OR5B3Q8NH48 314 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 SCARB1Q8WTV0 552 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 MARC2Q969Z3 335 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 BSCL2Q96G97 398 aaPredicted RBP10.68□□□□□ -0.7
VTI1A-209ENST00000496445 CHRDL1Q9BU40 450 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 PRNDQ9UKY0 176 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 UFC1Q9Y3C8 167 aa10.68□□□□□ -0.7
VTI1A-209ENST00000496445 CYB5BO43169 146 aa10.67□□□□□ -0.7
VTI1A-209ENST00000496445 SLC16A13Q7RTY0 426 aa10.67□□□□□ -0.7
VTI1A-209ENST00000496445 LHFPL1Q86WI0 220 aa10.67□□□□□ -0.7
VTI1A-209ENST00000496445 OR52B4Q8NGK2 314 aa10.67□□□□□ -0.7
VTI1A-209ENST00000496445 MRGPRFQ96AM1 343 aa10.67□□□□□ -0.7
VTI1A-209ENST00000496445 TSC22D3Q99576 134 aa10.67□□□□□ -0.7
VTI1A-209ENST00000496445 C21orf62Q9NYP8 219 aa10.67□□□□□ -0.7
VTI1A-209ENST00000496445 MRPL27Q9P0M9 148 aaKnown RBP10.67□□□□□ -0.7
VTI1A-209ENST00000496445 KLK11Q9UBX7 282 aa10.67□□□□□ -0.7
VTI1A-209ENST00000496445 TRAV25A0A0B4J276 109 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 FAM25AB3EWG3 89 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 FAM25CB3EWG5 89 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 FAM25GB3EWG6 89 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 MZT2AQ6P582 158 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 OR1P1Q8NH06 330 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 OR52I2Q8NH67 350 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 AP3S1Q92572 193 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 TMEM56Q96MV1 263 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 ATP6V0BQ99437 205 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 DAZ1Q9NQZ3 744 aaKnown RBP10.66□□□□□ -0.7
VTI1A-209ENST00000496445 EXTL2Q9UBQ6 330 aa10.66□□□□□ -0.7
VTI1A-209ENST00000496445 IGHV3OR16-8A0A075B7F1 116 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 LCE6AA0A183 80 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 NDUFA4O00483 81 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 CD3DP04234 171 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 ZNF182P17025 639 aaPredicted RBP10.65□□□□□ -0.7
VTI1A-209ENST00000496445 PI3P19957 117 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 S100GP29377 79 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 RND3P61587 244 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 PRCDQ00LT1 54 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 GPR107Q5VW38 600 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 SPSB3Q6PJ21 355 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 OR2C3Q8N628 320 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 UBAC2Q8NBM4 344 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 ZNF114Q8NC26 417 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 OR1L6Q8NGR2 347 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 ABHD1Q96SE0 405 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 FKBP11Q9NYL4 201 aa10.65□□□□□ -0.7
VTI1A-209ENST00000496445 I3L2K1 104 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 IGKV1-5P01602 117 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 P0C879 139 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 IZUMO4Q1ZYL8 232 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 Q56UQ5 140 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 RNASE10Q5GAN6 216 aaKnown RBP10.64□□□□□ -0.71
VTI1A-209ENST00000496445 RBPMS2Q6ZRY4 209 aaKnown RBP10.64□□□□□ -0.71
VTI1A-209ENST00000496445 H2BFWTQ7Z2G1 175 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 OR4D10Q8NGI6 311 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 OR4A16Q8NH70 328 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 ZNF486Q96H40 463 aaPredicted RBP10.64□□□□□ -0.71
VTI1A-209ENST00000496445 TP53RKQ96S44 253 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 GGTLC1Q9BX51 225 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 MIXL1Q9H2W2 232 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 C5orf66Q9H5L9 145 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 MTFP1Q9UDX5 166 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 BIRC6Q9NR09 4857 aa10.64□□□□□ -0.71
VTI1A-209ENST00000496445 TSPAN4O14817 238 aa10.63□□□□□ -0.71
VTI1A-209ENST00000496445 ZNF207O43670 478 aaKnown RBP10.63□□□□□ -0.71
VTI1A-209ENST00000496445 CTSGP08311 255 aa10.63□□□□□ -0.71
VTI1A-209ENST00000496445 FCGR2BP31994 310 aaPredicted RBP10.63□□□□□ -0.71
VTI1A-209ENST00000496445 PPP5CP53041 499 aa10.63□□□□□ -0.71
VTI1A-209ENST00000496445 PIGPP57054 158 aa10.63□□□□□ -0.71
VTI1A-209ENST00000496445 ANKRD55Q3KP44 614 aa10.63□□□□□ -0.71
VTI1A-209ENST00000496445 SPINK9Q5DT21 86 aa10.63□□□□□ -0.71
VTI1A-209ENST00000496445 ARRDC1Q8N5I2 433 aa10.63□□□□□ -0.71
VTI1A-209ENST00000496445 SPAG8Q99932 426 aaPredicted RBP10.63□□□□□ -0.71
VTI1A-209ENST00000496445 C20orf24Q9BUV8 137 aa10.63□□□□□ -0.71
VTI1A-209ENST00000496445 UBQLN2Q9UHD9 624 aa10.63□□□□□ -0.71
VTI1A-209ENST00000496445 KMT2AQ03164 3969 aa10.63□□□□□ -0.71
VTI1A-209ENST00000496445 LOC102724200A0A096LPH7 203 aaPredicted RBP10.62□□□□□ -0.71
VTI1A-209ENST00000496445 MT-CO2P00403 227 aa10.62□□□□□ -0.71
VTI1A-209ENST00000496445 CD74P04233 296 aa10.62□□□□□ -0.71
VTI1A-209ENST00000496445 PGAM2P15259 253 aa10.62□□□□□ -0.71
VTI1A-209ENST00000496445 TBPP20226 339 aa10.62□□□□□ -0.71
VTI1A-209ENST00000496445 ALDH3B2P48448 385 aa10.62□□□□□ -0.71
VTI1A-209ENST00000496445 HSPE1P61604 102 aaKnown RBP10.62□□□□□ -0.71
VTI1A-209ENST00000496445 SPCS2Q15005 226 aa10.62□□□□□ -0.71
VTI1A-209ENST00000496445 ODF3L2Q3SX64 289 aa10.62□□□□□ -0.71
VTI1A-209ENST00000496445 MISP3Q96FF7 219 aa10.62□□□□□ -0.71
VTI1A-209ENST00000496445 MRPS26Q9BYN8 205 aaKnown RBP10.62□□□□□ -0.71
VTI1A-209ENST00000496445 A0A0B4J293 547 aa10.61□□□□□ -0.71
VTI1A-209ENST00000496445 C15orf62A8K5M9 175 aa10.61□□□□□ -0.71
VTI1A-209ENST00000496445 K7EMT4 169 aa10.61□□□□□ -0.71
VTI1A-209ENST00000496445 IGHV3-48P01763 117 aa10.61□□□□□ -0.71
VTI1A-209ENST00000496445 TMEM229BQ8NBD8 167 aa10.61□□□□□ -0.71
VTI1A-209ENST00000496445 OVOL2Q9BRP0 275 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms