RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 CTRB2Q6GPI1 263 aa17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 SMIM8Q96KF7 97 aa17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 OR5AC2Q9NZP5 309 aa17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 TRAV14DV4A0A0A6YYC5 116 aa17.09■□□□□ 0.33
ECHDC3-205ENST00000496136 NPIPB5A8MRT5 1133 aa17.09■□□□□ 0.33
ECHDC3-205ENST00000496136 SNCAP37840 140 aa17.09■□□□□ 0.33
ECHDC3-205ENST00000496136 FGL1Q08830 312 aa17.09■□□□□ 0.33
ECHDC3-205ENST00000496136 C19orf35Q6ZS72 473 aa17.09■□□□□ 0.33
ECHDC3-205ENST00000496136 NEURL2Q9BR09 285 aa17.09■□□□□ 0.33
ECHDC3-205ENST00000496136 U3KQ87 197 aa17.09■□□□□ 0.33
ECHDC3-205ENST00000496136 G3V3Q6 166 aa17.08■□□□□ 0.33
ECHDC3-205ENST00000496136 SMLR1H3BR10 107 aa17.08■□□□□ 0.33
ECHDC3-205ENST00000496136 SOX15O60248 233 aa17.08■□□□□ 0.33
ECHDC3-205ENST00000496136 BSXQ3C1V8 233 aa17.08■□□□□ 0.33
ECHDC3-205ENST00000496136 P2RX4Q99571 388 aa17.08■□□□□ 0.33
ECHDC3-205ENST00000496136 WNT10AQ9GZT5 417 aa17.08■□□□□ 0.33
ECHDC3-205ENST00000496136 FBXO24O75426 580 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 LY86O95711 162 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 PET100P0DJ07 73 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 HKR1P10072 659 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 PVALBP20472 110 aaPredicted RBP17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 TAS2R30P59541 319 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 CFHR3Q02985 330 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 CD300CQ08708 224 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 PRSS54Q6PEW0 395 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 FAM110DQ8TAY7 271 aaPredicted RBP17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 GON7Q9BXV9 100 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 PSENENQ9NZ42 101 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 ATRQ13535 2644 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 L7N2F9 121 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 IFNA10P01566 189 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 RNASE2P10153 161 aaKnown RBP17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 HTR2BP41595 481 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 VAMP2P63027 116 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 SPANXN5Q5MJ07 72 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 ZNF329Q86UD4 541 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 ZNF114Q8NC26 417 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 SLC24A4Q8NFF2 622 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 OR4F5Q8NH21 305 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 THAP6Q8TBB0 222 aa17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 F11RQ9Y624 299 aaKnown RBP17.07■□□□□ 0.32
ECHDC3-205ENST00000496136 H3BP45 60 aa17.06■□□□□ 0.32
ECHDC3-205ENST00000496136 DEFA4P12838 97 aa17.06■□□□□ 0.32
ECHDC3-205ENST00000496136 CENPVQ7Z7K6 275 aaPredicted RBP17.06■□□□□ 0.32
ECHDC3-205ENST00000496136 TCTE3Q8IZS6 198 aa17.06■□□□□ 0.32
ECHDC3-205ENST00000496136 TMEM170AQ8WVE7 144 aa17.06■□□□□ 0.32
ECHDC3-205ENST00000496136 MBD2Q9UBB5 411 aa17.06■□□□□ 0.32
ECHDC3-205ENST00000496136 DMRT1Q9Y5R6 373 aa17.06■□□□□ 0.32
ECHDC3-205ENST00000496136 E5RGE8 158 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 PRH1P02810 166 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 LYL1P12980 280 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 MFAP2P55001 183 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 RPL23AP62750 156 aaKnown RBP17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 C10orf99Q6UWK7 81 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 OR1P1Q8NH06 330 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 PSMB11A5LHX3 300 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 TSC22D2O75157 780 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 IGLV1-40P01703 118 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 SUB1P53999 127 aaKnown RBP eCLIP17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 C2orf83Q53S99 150 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 FANCD2OSQ96PS1 177 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 OR4C12Q96R67 309 aa17.05■□□□□ 0.32
ECHDC3-205ENST00000496136 C15orf62A8K5M9 175 aa17.04■□□□□ 0.32
ECHDC3-205ENST00000496136 MDKP21741 143 aaPredicted RBP17.04■□□□□ 0.32
ECHDC3-205ENST00000496136 NPY1RP25929 384 aa17.04■□□□□ 0.32
ECHDC3-205ENST00000496136 ATP5IP56385 69 aaPredicted RBP17.04■□□□□ 0.32
ECHDC3-205ENST00000496136 RPP30P78346 268 aaKnown RBP17.04■□□□□ 0.32
ECHDC3-205ENST00000496136 ZNF355PQ9NSJ1 428 aa17.04■□□□□ 0.32
ECHDC3-205ENST00000496136 LYRM2Q9NU23 88 aaPredicted RBP17.04■□□□□ 0.32
ECHDC3-205ENST00000496136 STRAPQ9Y3F4 350 aaKnown RBP17.04■□□□□ 0.32
ECHDC3-205ENST00000496136 CLPSL1A2RUU4 121 aa17.03■□□□□ 0.32
ECHDC3-205ENST00000496136 FAM24AA6NFZ4 105 aa17.03■□□□□ 0.32
ECHDC3-205ENST00000496136 IGHG4P01861 327 aa17.03■□□□□ 0.32
ECHDC3-205ENST00000496136 SLC25A4P12235 298 aa17.03■□□□□ 0.32
ECHDC3-205ENST00000496136 P2RY1P47900 373 aa17.03■□□□□ 0.32
ECHDC3-205ENST00000496136 CAV2P51636 162 aa17.03■□□□□ 0.32
ECHDC3-205ENST00000496136 SLC35B1P78383 322 aa17.03■□□□□ 0.32
ECHDC3-205ENST00000496136 PVRIGQ6DKI7 326 aa17.03■□□□□ 0.32
ECHDC3-205ENST00000496136 SLC25A24Q6NUK1 477 aa17.03■□□□□ 0.32
ECHDC3-205ENST00000496136 RNF114Q9Y508 228 aa17.03■□□□□ 0.32
ECHDC3-205ENST00000496136 TMEM14EPQ6UXP3 125 aa17.02■□□□□ 0.32
ECHDC3-205ENST00000496136 OR1L6Q8NGR2 347 aa17.02■□□□□ 0.32
ECHDC3-205ENST00000496136 MS4A10Q96PG2 267 aa17.02■□□□□ 0.32
ECHDC3-205ENST00000496136 PAIP2BQ9ULR5 123 aaKnown RBP17.02■□□□□ 0.32
ECHDC3-205ENST00000496136 KLK9Q2XQG4 91 aa17.02■□□□□ 0.31
ECHDC3-205ENST00000496136 TEX38Q6PEX7 206 aa17.02■□□□□ 0.31
ECHDC3-205ENST00000496136 KLHDC1Q8N7A1 406 aa17.02■□□□□ 0.31
ECHDC3-205ENST00000496136 WIPF2Q8TF74 440 aaPredicted RBP17.02■□□□□ 0.31
ECHDC3-205ENST00000496136 DCUN1D4Q92564 292 aa17.02■□□□□ 0.31
ECHDC3-205ENST00000496136 KLK15Q9H2R5 256 aa17.02■□□□□ 0.31
ECHDC3-205ENST00000496136 KLK9Q9UKQ9 250 aa17.02■□□□□ 0.31
ECHDC3-205ENST00000496136 IGLV11-55A0A075B6I3 123 aa17.01■□□□□ 0.31
ECHDC3-205ENST00000496136 TRBV9A0A0B4J1U6 114 aa17.01■□□□□ 0.31
ECHDC3-205ENST00000496136 PFDN1O60925 122 aa17.01■□□□□ 0.31
ECHDC3-205ENST00000496136 BRI3O95415 125 aa17.01■□□□□ 0.31
ECHDC3-205ENST00000496136 PSMB8P28062 276 aa17.01■□□□□ 0.31
ECHDC3-205ENST00000496136 NOXA1Q86UR1 476 aa17.01■□□□□ 0.31
ECHDC3-205ENST00000496136 TMEM252Q8N6L7 170 aa17.01■□□□□ 0.31
ECHDC3-205ENST00000496136 OR11H4Q8NGC9 324 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms