RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 IGHV3-21A0A0B4J1V1 117 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 C15orf61A6NNL5 157 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 GABARAPO95166 117 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 PGAM2P15259 253 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 MFAP2P55001 183 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 RNASE10Q5GAN6 216 aaKnown RBP9.56□□□□□ -0.88
PTPRF-214ENST00000496043 GPR107Q5VW38 600 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 ZFAND6Q6FIF0 208 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 LAMTOR1Q6IAA8 161 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 OR1P1Q8NH06 330 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 ZNF486Q96H40 463 aaPredicted RBP9.56□□□□□ -0.88
PTPRF-214ENST00000496043 C5orf66Q9H5L9 145 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 GAR1Q9NY12 217 aaKnown RBP9.56□□□□□ -0.88
PTPRF-214ENST00000496043 EXTL2Q9UBQ6 330 aa9.56□□□□□ -0.88
PTPRF-214ENST00000496043 DBX1A6NMT0 343 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 K7EIM0 57 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 K7EMT4 169 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 NDUFA4O00483 81 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 IGKV1-39P01597 117 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 IGKV1D-39P04432 117 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 RND3P61587 244 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 HSPE1P61604 102 aaKnown RBP9.55□□□□□ -0.88
PTPRF-214ENST00000496043 ERHP84090 104 aaKnown RBP9.55□□□□□ -0.88
PTPRF-214ENST00000496043 Q56UQ5 140 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 RNASE12Q5GAN4 147 aaKnown RBP9.55□□□□□ -0.88
PTPRF-214ENST00000496043 ARRDC1Q8N5I2 433 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 OR2C3Q8N628 320 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 UBAC2Q8NBM4 344 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 OR52I2Q8NH67 350 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 IL17DQ8TAD2 202 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 TMEM190Q8WZ59 177 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 CHRDL1Q9BU40 450 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 WFDC10AQ9H1F0 79 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 RETNQ9HD89 108 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 DAZ1Q9NQZ3 744 aaKnown RBP9.55□□□□□ -0.88
PTPRF-214ENST00000496043 MTFP1Q9UDX5 166 aa9.55□□□□□ -0.88
PTPRF-214ENST00000496043 RYR3Q15413 4870 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 ATG12O94817 140 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 CD3DP04234 171 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 SMIM18P0DKX4 95 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 TBPP20226 339 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 MFAP4P55083 255 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 TERB2Q8NHR7 220 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 ZFAND1Q8TCF1 268 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 MRGPRFQ96AM1 343 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 MISP3Q96FF7 219 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 ABHD1Q96SE0 405 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 TXN2Q99757 166 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 C20orf24Q9BUV8 137 aa9.54□□□□□ -0.88
PTPRF-214ENST00000496043 LOC102724200A0A096LPH7 203 aaPredicted RBP9.53□□□□□ -0.88
PTPRF-214ENST00000496043 F8W735 103 aaPredicted RBP9.53□□□□□ -0.88
PTPRF-214ENST00000496043 TSPAN4O14817 238 aa9.53□□□□□ -0.88
PTPRF-214ENST00000496043 NUPL2O15504 423 aaKnown RBP9.53□□□□□ -0.88
PTPRF-214ENST00000496043 CTSGP08311 255 aa9.53□□□□□ -0.88
PTPRF-214ENST00000496043 ADMP35318 185 aa9.53□□□□□ -0.88
PTPRF-214ENST00000496043 PIGPP57054 158 aa9.53□□□□□ -0.88
PTPRF-214ENST00000496043 PRCDQ00LT1 54 aa9.53□□□□□ -0.88
PTPRF-214ENST00000496043 GPR141Q7Z602 305 aa9.53□□□□□ -0.88
PTPRF-214ENST00000496043 LHFPL1Q86WI0 220 aa9.53□□□□□ -0.88
PTPRF-214ENST00000496043 TMEM229BQ8NBD8 167 aa9.53□□□□□ -0.88
PTPRF-214ENST00000496043 SPAG8Q99932 426 aaPredicted RBP9.53□□□□□ -0.88
PTPRF-214ENST00000496043 GGTLC1Q9BX51 225 aa9.53□□□□□ -0.88
PTPRF-214ENST00000496043 MRPS26Q9BYN8 205 aaKnown RBP9.53□□□□□ -0.88
PTPRF-214ENST00000496043 C3orf85A0A1B0GTC6 90 aa9.52□□□□□ -0.89
PTPRF-214ENST00000496043 C15orf62A8K5M9 175 aa9.52□□□□□ -0.89
PTPRF-214ENST00000496043 RGS5O15539 181 aa9.52□□□□□ -0.89
PTPRF-214ENST00000496043 RAB3DO95716 219 aa9.52□□□□□ -0.89
PTPRF-214ENST00000496043 PI3P19957 117 aa9.52□□□□□ -0.89
PTPRF-214ENST00000496043 FCGR2BP31994 310 aaPredicted RBP9.52□□□□□ -0.89
PTPRF-214ENST00000496043 TAS2R19P59542 299 aa9.52□□□□□ -0.89
PTPRF-214ENST00000496043 RELQ04864 619 aaPredicted RBP9.52□□□□□ -0.89
PTPRF-214ENST00000496043 CCDC71LQ8N9Z2 235 aa9.52□□□□□ -0.89
PTPRF-214ENST00000496043 FAM110AQ9BQ89 295 aa9.52□□□□□ -0.89
PTPRF-214ENST00000496043 COPZ2Q9P299 210 aa9.52□□□□□ -0.89
PTPRF-214ENST00000496043 GABARAPH6UMI1 98 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 I3L2K1 104 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 CTDSP2O14595 271 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 ZNF207O43670 478 aaKnown RBP9.51□□□□□ -0.89
PTPRF-214ENST00000496043 YIF1AO95070 293 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 MT-CO2P00403 227 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 CD74P04233 296 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 SNCAP37840 140 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 ALDH3B2P48448 385 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 MRPS10P82664 201 aaKnown RBP9.51□□□□□ -0.89
PTPRF-214ENST00000496043 SSBP1Q04837 148 aaKnown RBP9.51□□□□□ -0.89
PTPRF-214ENST00000496043 IZUMO4Q1ZYL8 232 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 SCGB2B2Q4G0G5 96 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 STEAP1BQ6NZ63 245 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 ZNF114Q8NC26 417 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 TP53RKQ96S44 253 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 MIXL1Q9H2W2 232 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 SMPXQ9UHP9 88 aa9.51□□□□□ -0.89
PTPRF-214ENST00000496043 DNAH7Q8WXX0 4024 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 IGHV3OR16-8A0A075B7F1 116 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 A0A0B4J293 547 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 LCE6AA0A183 80 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 OR4C46A6NHA9 309 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 GNG7O60262 68 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 B3GALNT1O75752 331 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 IFNA17P01571 189 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms