RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 RAB5CP51148 216 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 CX3CL1P78423 397 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 LAMTOR1Q6IAA8 161 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 ZNF833PQ6ZTB9 187 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 TECRQ9NZ01 308 aaKnown RBP7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 SIGLEC9Q9Y336 463 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 ZNF207O43670 478 aaKnown RBP7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 CT45A10P0DMU9 189 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 S100PP25815 95 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 CNTFRP26992 372 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 H2BFSP57053 126 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 LMO4P61968 165 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 LINC00311Q8N616 119 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 FOXC2Q99958 501 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 IGHV3OR16-13A0A075B7E8 117 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 IGHV3-74A0A0B4J1X5 117 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 OR2T8A6NH00 312 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 SLC25A5P05141 298 aaKnown RBP7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 FCGR2BP31994 310 aaPredicted RBP7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 ZNF137PP52743 207 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 ZNF660Q6AZW8 331 aaPredicted RBP7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 TPPP3Q9BW30 176 aa7.66□□□□□ -1.18
GAPVD1-219ENST00000495955 IGHV3OR16-8A0A075B7F1 116 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 TRAV3A0A0B4J244 114 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 MDFIC2A0A1B0GVS7 189 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 IGHV4-31P0DP07 118 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 ID1P41134 155 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 PXDC1Q5TGL8 231 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 TBX15Q96SF7 602 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 PXMP4Q9Y6I8 212 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 APOC3P02656 99 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 NPPCP23582 126 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 ATP5IP56385 69 aaPredicted RBP7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 ARL16Q0P5N6 197 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 TOR2AQ5JU69 321 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 STXBP6Q8NFX7 210 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 DSCAMO60469 2012 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 IGHV3-49A0A0A0MS15 119 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 MAP1LC3B2A6NCE7 125 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 SNRPCP09234 159 aaKnown RBP7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 FGF8P55075 233 aaPredicted RBP7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 SELENOTP62341 195 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 PRCDQ00LT1 54 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 RHEBQ15382 184 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 MAP1LC3BQ9GZQ8 125 aa7.65□□□□□ -1.18
GAPVD1-219ENST00000495955 IL4P05112 153 aa7.65□□□□□ -1.19
GAPVD1-219ENST00000495955 TEX38Q6PEX7 206 aa7.65□□□□□ -1.19
GAPVD1-219ENST00000495955 ZNF295-AS1Q8N0V1 137 aa7.65□□□□□ -1.19
GAPVD1-219ENST00000495955 ST6GAL2Q96JF0 529 aa7.65□□□□□ -1.19
GAPVD1-219ENST00000495955 TMEM208Q9BTX3 173 aa7.65□□□□□ -1.19
GAPVD1-219ENST00000495955 PLSCR3Q9NRY6 295 aa7.65□□□□□ -1.19
GAPVD1-219ENST00000495955 MYOD1P15172 320 aa7.65□□□□□ -1.19
GAPVD1-219ENST00000495955 AKR1C3P42330 323 aa7.65□□□□□ -1.19
GAPVD1-219ENST00000495955 DLX6P56179 175 aa7.65□□□□□ -1.19
GAPVD1-219ENST00000495955 TMEM167AQ8TBQ9 72 aa7.65□□□□□ -1.19
GAPVD1-219ENST00000495955 OVOL3O00110 214 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 RAB4BP61018 213 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 RUNX1Q01196 453 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 PJVKQ0ZLH3 352 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 CLEC5AQ9NY25 188 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 IGHV3-66A0A0C4DH42 116 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 A0A1W2PPR1 153 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 MIC13Q5XKP0 118 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 OR11H6Q8NGC7 330 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 TNFSF18Q9UNG2 199 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 SSTP61278 116 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 ZNF257Q9Y2Q1 563 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 TIMM8BQ9Y5J9 83 aaPredicted RBP7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 VCANP13611 3396 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 FAM90A9PA6NNJ1 464 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 TIGITQ495A1 244 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 KLF17Q5JT82 389 aaPredicted RBP7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 RSG1Q9BU20 258 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 VPREB3Q9UKI3 123 aa7.64□□□□□ -1.19
GAPVD1-219ENST00000495955 WIPF3A6NGB9 483 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 MPDU1O75352 247 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 FLI1Q01543 452 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 RNASEH2CQ8TDP1 164 aaKnown RBP7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 PEMTQ9UBM1 199 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 PUS1Q9Y606 427 aaKnown RBP eCLIP7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 PAX1P15863 534 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 KIAA0141Q14154 515 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 C16orf92Q96LL3 132 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 ZNF292O60281 2723 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 CNN1P51911 297 aaKnown RBP7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 DLK1P80370 383 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 C15orf32Q32M92 178 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 KHDC3LQ587J8 217 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 TMEM41BQ5BJD5 291 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 KLHL30-AS1Q8NEE0 82 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 RXFP4Q8TDU9 374 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 DYSFO75923 2080 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 MYO18BQ8IUG5 2567 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.63□□□□□ -1.196e-7■■■□□ 18.2
GAPVD1-219ENST00000495955 FOXI3A8MTJ6 420 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 ATP6V0E1O15342 81 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 ATP6V0CP27449 155 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 C2orf68Q2NKX9 166 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 OR5AU1Q8NGC0 362 aa7.63□□□□□ -1.19
GAPVD1-219ENST00000495955 CHAC2Q8WUX2 184 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms