RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 PLXNA1Q9UIW2 1896 aa4.4□□□□□ -1.7
NF1-216ENST00000495910 DDX60LQ5H9U9 1706 aaKnown RBP4.4□□□□□ -1.71
NF1-216ENST00000495910 PTGDSP41222 190 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 CRYBA4P53673 196 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 UCP2P55851 309 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 CCL13Q99616 98 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 Q9H3A6 140 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 A0A087X0K7 114 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 FAM90A10PA6NDY2 464 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 FAM90A20PA6NIJ5 464 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 FAM90A8PA6NJQ4 464 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 NPIPB13A6NJU9 1138 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 NPIPB5A8MRT5 1133 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 FAM90A13PP0C7W8 464 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 FAM90A24PP0C7X0 464 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 MPV17P39210 176 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 ABHD12Q8N2K0 398 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 WFDC11Q8NEX6 87 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 SMIM2Q9BVW6 85 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 USP54Q70EL1 1684 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 COL2A1P02458 1487 aaPredicted RBP4.4□□□□□ -1.71
NF1-216ENST00000495910 LOC102723996A0A087X1L8 192 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 UPK3AO75631 287 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 SRFP11831 508 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 GAS1P54826 345 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 DPTQ07507 201 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 TMEM54Q969K7 222 aa4.4□□□□□ -1.71
NF1-216ENST00000495910 NDUFA2O43678 99 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 ZIC3O60481 467 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 COL9A1P20849 921 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 FGF12P61328 243 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 MPV17L2Q567V2 206 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 C1orf220Q5T0J3 134 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 FGF22Q9HCT0 170 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 TTC3P53804 2025 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 PIKFYVEQ9Y2I7 2098 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 ANKRD31Q8N7Z5 1873 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 A0A1W2PPV9 198 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 LILRA5A6NI73 299 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 F6UB75 175 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 KLK8O60259 260 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 AZU1P20160 251 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 CDKN1AP38936 164 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 DAD1P61803 113 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 PRB3Q04118 309 aaPredicted RBP4.39□□□□□ -1.71
NF1-216ENST00000495910 CLLU1OSQ5K130 101 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 TMEM167AQ8TBQ9 72 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 TIMM21Q9BVV7 248 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 OSTCQ9NRP0 149 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 JPT1Q9UK76 154 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 SIPA1L3O60292 1781 aaPredicted RBP4.39□□□□□ -1.71
NF1-216ENST00000495910 IGHV3-66A0A0C4DH42 116 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 D6R8Y8 96 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 FOXL2P58012 376 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 ERCC8Q13216 396 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 LY6EQ16553 131 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 C17orf99Q6UX52 265 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 MUSTN1Q8IVN3 82 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 C14orf132Q9NPU4 83 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 RGPD4Q7Z3J3 1758 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 ZNF646O15015 1829 aaPredicted RBP4.39□□□□□ -1.71
NF1-216ENST00000495910 A8MWP6 167 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 PRB2P02812 416 aaPredicted RBP4.39□□□□□ -1.71
NF1-216ENST00000495910 SPINK2P20155 84 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 SS18Q15532 418 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 LRP10Q7Z4F1 713 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 NKAPP1Q8N9T2 125 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 RCC1LQ96I51 464 aaKnown RBP4.39□□□□□ -1.71
NF1-216ENST00000495910 TRAV12-2A0A075B6T6 113 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 TMEM202A6NGA9 273 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 CEACAM1P13688 526 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 UCP1P25874 307 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 PEAR1Q5VY43 1037 aaPredicted RBP4.39□□□□□ -1.71
NF1-216ENST00000495910 ZNF784Q8NCA9 323 aaPredicted RBP4.39□□□□□ -1.71
NF1-216ENST00000495910 SCRT1Q9BWW7 348 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 RETNQ9HD89 108 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 A0A0A6YYD4 124 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 KLK10O43240 276 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 RPL23P62829 140 aaKnown RBP4.39□□□□□ -1.71
NF1-216ENST00000495910 PRIMA1Q86XR5 153 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 HIST1H2BLQ99880 126 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 R4GN57 208 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 TRPM6Q9BX84 2022 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 PHIPQ8WWQ0 1821 aa4.39□□□□□ -1.71
NF1-216ENST00000495910 TRA2AQ13595 282 aaKnown RBP eCLIP4.38□□□□□ -1.71
NF1-216ENST00000495910 C15orf53Q8NAA6 179 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 OR9G1Q8NH87 305 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 CRYBG1Q9Y4K1 1723 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 LHBP01229 141 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 SCTP09683 121 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 ATP5G3P48201 142 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 CCL20P78556 96 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 TAL2Q16559 108 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 C1QL3Q5VWW1 255 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 VN1R2Q8NFZ6 395 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 RBM38Q9H0Z9 239 aaKnown RBP4.38□□□□□ -1.71
NF1-216ENST00000495910 NHSL1Q5SYE7 1610 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 TRPM7Q96QT4 1865 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 FOXC1Q12948 553 aa4.38□□□□□ -1.71
NF1-216ENST00000495910 SLAQ13239 276 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms