RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 NUPL2O15504 423 aaKnown RBP9.68□□□□□ -0.86
COL1A1-209ENST00000495677 CD74P04233 296 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 DEFB131AP59861 70 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 RPS25P62851 125 aaKnown RBP9.68□□□□□ -0.86
COL1A1-209ENST00000495677 C12orf74Q32Q52 190 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 CDNFQ49AH0 187 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 SOHLH1Q5JUK2 328 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 ZNF773Q6PK81 442 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 TCF24Q7RTU0 167 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 GBGT1Q8N5D6 347 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 CSNK1G2-AS1Q8NCQ2 148 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 DUSP18Q8NEJ0 188 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 GPHA2Q96T91 129 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 ANXA10Q9UJ72 324 aa9.68□□□□□ -0.86
COL1A1-209ENST00000495677 TRAV1-2A0A0B4J238 106 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 IFITM5A6NNB3 132 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 FABP5Q01469 135 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 Q56UQ5 140 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 Q6ZRM9 215 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 TRPT1Q86TN4 253 aaKnown RBP9.67□□□□□ -0.86
COL1A1-209ENST00000495677 UBAC2Q8NBM4 344 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 LSM10Q969L4 123 aaKnown RBP9.67□□□□□ -0.86
COL1A1-209ENST00000495677 NXF2Q9GZY0 626 aaKnown RBP9.67□□□□□ -0.86
COL1A1-209ENST00000495677 MS4A6AQ9H2W1 248 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 VCXQ9H320 206 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 ACOT13Q9NPJ3 140 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 CCL28Q9NRJ3 127 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 TMEM140Q9NV12 185 aa9.67□□□□□ -0.86
COL1A1-209ENST00000495677 IGHV3-21A0A0B4J1V1 117 aa9.66□□□□□ -0.86
COL1A1-209ENST00000495677 PTGES3LE9PB15 166 aa9.66□□□□□ -0.86
COL1A1-209ENST00000495677 DNASE2O00115 360 aaPredicted RBP9.66□□□□□ -0.86
COL1A1-209ENST00000495677 PDCD5O14737 125 aa9.66□□□□□ -0.86
COL1A1-209ENST00000495677 CATR1Q13166 79 aa9.66□□□□□ -0.86
COL1A1-209ENST00000495677 OGFRL1Q5TC84 451 aaPredicted RBP9.66□□□□□ -0.86
COL1A1-209ENST00000495677 LEMD1Q68G75 181 aa9.66□□□□□ -0.86
COL1A1-209ENST00000495677 FAM210BQ96KR6 192 aa9.66□□□□□ -0.86
COL1A1-209ENST00000495677 GINS3Q9BRX5 216 aa9.66□□□□□ -0.86
COL1A1-209ENST00000495677 IGHV3-49A0A0A0MS15 119 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 TNFSF12O43508 249 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 YIF1AO95070 293 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 IFNA10P01566 189 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 IFNA21P01568 189 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 IFNA17P01571 189 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 NPY1RP25929 384 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 MFAP4P55083 255 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 MLLT11Q13015 90 aaPredicted RBP9.65□□□□□ -0.86
COL1A1-209ENST00000495677 RNF212Q495C1 297 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 LILRB2Q8N423 598 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 DMBX1Q8NFW5 382 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 OR1P1Q8NH06 330 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 SECTM1Q8WVN6 248 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 GRAMD2BQ96HH9 432 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 ATG5Q9H1Y0 275 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 TMEM14BQ9NUH8 114 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 COMMD9Q9P000 198 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 TBC1D24Q9ULP9 559 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 CELA1Q9UNI1 258 aa9.65□□□□□ -0.86
COL1A1-209ENST00000495677 I3L2K1 104 aa9.64□□□□□ -0.87
COL1A1-209ENST00000495677 SULT1C2O00338 296 aa9.64□□□□□ -0.87
COL1A1-209ENST00000495677 ST8SIA3O43173 380 aa9.64□□□□□ -0.87
COL1A1-209ENST00000495677 EIF4EP06730 217 aaKnown RBP9.64□□□□□ -0.87
COL1A1-209ENST00000495677 OR10A3P58181 314 aa9.64□□□□□ -0.87
COL1A1-209ENST00000495677 Q8N1X5 172 aa9.64□□□□□ -0.87
COL1A1-209ENST00000495677 FAM24BQ8N5W8 94 aa9.64□□□□□ -0.87
COL1A1-209ENST00000495677 MAPKAPK5-AS1Q8N8E1 139 aa9.64□□□□□ -0.87
COL1A1-209ENST00000495677 ST8SIA2Q92186 375 aa9.64□□□□□ -0.87
COL1A1-209ENST00000495677 TMEM56Q96MV1 263 aa9.64□□□□□ -0.87
COL1A1-209ENST00000495677 IGHV3OR16-13A0A075B7E8 117 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 IGHV3-74A0A0B4J1X5 117 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 K7EQG2 157 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 CASQ2O14958 399 aaPredicted RBP9.63□□□□□ -0.87
COL1A1-209ENST00000495677 SCGNO76038 276 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 PPYP01298 95 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 HSMCR30P0CW71 290 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 C4BPBP20851 252 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 FCGR2CP31995 323 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 AQP4P55087 323 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 ARPC4P59998 168 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 C1orf134Q5TEV5 83 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 OR13F1Q8NGS4 319 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 NUDCD2Q8WVJ2 157 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 NRG4Q8WWG1 115 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 CCDC90BQ9GZT6 254 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 SCN3BQ9NY72 215 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 FKBP11Q9NYL4 201 aa9.63□□□□□ -0.87
COL1A1-209ENST00000495677 MARCH11A6NNE9 402 aa9.62□□□□□ -0.87
COL1A1-209ENST00000495677 SSX5O60225 188 aa9.62□□□□□ -0.87
COL1A1-209ENST00000495677 APOHP02749 345 aaPredicted RBP9.62□□□□□ -0.87
COL1A1-209ENST00000495677 RAB3BP20337 219 aa9.62□□□□□ -0.87
COL1A1-209ENST00000495677 TOMM20LQ6UXN7 152 aa9.62□□□□□ -0.87
COL1A1-209ENST00000495677 MGLLQ99685 303 aa9.62□□□□□ -0.87
COL1A1-209ENST00000495677 SCRT1Q9BWW7 348 aa9.62□□□□□ -0.87
COL1A1-209ENST00000495677 SLC5A7Q9GZV3 580 aa9.62□□□□□ -0.87
COL1A1-209ENST00000495677 DUSP21Q9H596 190 aa9.62□□□□□ -0.87
COL1A1-209ENST00000495677 TMEM231Q9H6L2 316 aa9.62□□□□□ -0.87
COL1A1-209ENST00000495677 OR51B2Q9Y5P1 312 aa9.62□□□□□ -0.87
COL1A1-209ENST00000495677 LRP1BQ9NZR2 4599 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 IGLV2-18A0A075B6J9 118 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 TMEM235A6NFC5 223 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 C16orf90A8MZG2 172 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms