RNA–Protein interactions for RNA: ENST00000495636.1

SLC6A1-205, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 1,088 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-205ENST00000495636 UBAC2Q8NBM4 344 aa11.91□□□□□ -0.5
SLC6A1-205ENST00000495636 FAM212BQ9NTI7 297 aaPredicted RBP11.91□□□□□ -0.5
SLC6A1-205ENST00000495636 TMEM14BQ9NUH8 114 aa11.91□□□□□ -0.5
SLC6A1-205ENST00000495636 UBQLN2Q9UHD9 624 aa11.91□□□□□ -0.5
SLC6A1-205ENST00000495636 EPPK1P58107 5090 aaKnown RBP11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 KIR2DL5BA0A0G2JN68 375 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 KIR2DL5BA0A0G2JPC4 375 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 OR4C46A6NHA9 309 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 C15orf61A6NNL5 157 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 C15orf62A8K5M9 175 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 ODF3L2Q3SX64 289 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 LPCAT3Q6P1A2 487 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 KIR2DL5AQ8N109 375 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 OR1P1Q8NH06 330 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 KIR2DL5BQ8NHK3 375 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 YIPF6Q96EC8 236 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 VCX3AQ9NNX9 186 aa11.9□□□□□ -0.5
SLC6A1-205ENST00000495636 A0A0J9YWU9 116 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 CXorf65A6NEN9 183 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 SPRY2O43597 315 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 HLA-DMAP28067 261 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 LSM3P62310 102 aaKnown RBP11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 TNFRSF9Q07011 255 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 DEFB135Q30KP9 77 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 PHLDA2Q53GA4 152 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 LYSMD2Q8IV50 215 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 GPX8Q8TED1 209 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 LINC00476Q8WZB0 136 aa11.89□□□□□ -0.51
SLC6A1-205ENST00000495636 IGHV3OR16-8A0A075B7F1 116 aa11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 NUPR2A6NF83 97 aa11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 DBX1A6NMT0 343 aa11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 ZNF207O43670 478 aaKnown RBP11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 CTSDP07339 412 aaPredicted RBP11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 FCGR2BP31994 310 aaPredicted RBP11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 TSPAN5P62079 268 aa11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 RELQ04864 619 aaPredicted RBP11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 PMS2P11Q13670 270 aa11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 STPG3Q8N7X2 389 aa11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 SLC25A46Q96AG3 418 aa11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 BIRC6Q9NR09 4857 aa11.88□□□□□ -0.51
SLC6A1-205ENST00000495636 EIF4EP06730 217 aaKnown RBP11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 CTSGP08311 255 aa11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 ATF4P18848 351 aaPredicted RBP11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 H2BFWTQ7Z2G1 175 aa11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 TBC1D26Q86UD7 250 aa11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 RNF183Q96D59 192 aa11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 GALNT14Q96FL9 552 aa11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 SEC22AQ96IW7 307 aa11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 CMTM3Q96MX0 182 aa11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 TXN2Q99757 166 aa11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 SCPEP1Q9HB40 452 aa11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 SMPXQ9UHP9 88 aa11.87□□□□□ -0.51
SLC6A1-205ENST00000495636 A0A087WXM4 84 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 SMIM31A0A1B0GVY4 71 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 I3L2K1 104 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 APOA1P02647 267 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 RCVRNP35243 200 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 MFAP4P55083 255 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 UCP3P55916 312 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 PRCDQ00LT1 54 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 ZNF114Q8NC26 417 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 OR4A16Q8NH70 328 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 MISP3Q96FF7 219 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 ZNF414Q96IQ9 312 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 OR10C1Q96KK4 312 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 RNF2Q99496 336 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 RHPN1-AS1Q9BWJ2 59 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 C6orf62Q9GZU0 229 aaPredicted RBP11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 COMMD3Q9UBI1 195 aa11.86□□□□□ -0.51
SLC6A1-205ENST00000495636 IGHV7-4-1A0A0J9YVY3 117 aa11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 CHEK1O14757 476 aa11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 YIF1AO95070 293 aa11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 RPL35AP18077 110 aaKnown RBP11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 EWSR1Q01844 656 aaKnown RBP eCLIP11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 SNX29P2Q8IUI4 249 aa11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 TMEM217Q8N7C4 229 aa11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 TMEM116Q8NCL8 245 aa11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 MRGPRFQ96AM1 343 aa11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 NXF2Q9GZY0 626 aaKnown RBP11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 MAP6D1Q9H9H5 199 aa11.85□□□□□ -0.51
SLC6A1-205ENST00000495636 TNFAIP8O95379 198 aa11.84□□□□□ -0.51
SLC6A1-205ENST00000495636 LY6G6CO95867 125 aa11.84□□□□□ -0.51
SLC6A1-205ENST00000495636 MT-CO2P00403 227 aa11.84□□□□□ -0.51
SLC6A1-205ENST00000495636 IGKV1-39P01597 117 aa11.84□□□□□ -0.51
SLC6A1-205ENST00000495636 IGKV1D-39P04432 117 aa11.84□□□□□ -0.51
SLC6A1-205ENST00000495636 CMC4P56277 68 aaPredicted RBP11.84□□□□□ -0.51
SLC6A1-205ENST00000495636 CEMP1Q6PRD7 247 aaPredicted RBP11.84□□□□□ -0.51
SLC6A1-205ENST00000495636 HYDINQ4G0P3 5121 aa11.84□□□□□ -0.51
SLC6A1-205ENST00000495636 PLECQ15149 4684 aaKnown RBP11.83□□□□□ -0.52
SLC6A1-205ENST00000495636 ALMS1Q8TCU4 4167 aa11.83□□□□□ -0.52
SLC6A1-205ENST00000495636 GNG7O60262 68 aa11.83□□□□□ -0.52
SLC6A1-205ENST00000495636 HSPE1P61604 102 aaKnown RBP11.83□□□□□ -0.52
SLC6A1-205ENST00000495636 NCS1P62166 190 aa11.83□□□□□ -0.52
SLC6A1-205ENST00000495636 ERHP84090 104 aaKnown RBP11.83□□□□□ -0.52
SLC6A1-205ENST00000495636 APRG1Q8IVJ8 170 aa11.83□□□□□ -0.52
SLC6A1-205ENST00000495636 PINX1Q96BK5 328 aaKnown RBP11.83□□□□□ -0.52
SLC6A1-205ENST00000495636 GINS3Q9BRX5 216 aa11.83□□□□□ -0.52
SLC6A1-205ENST00000495636 KLK5Q9Y337 293 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms