RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 REG1AP05451 166 aa13.31□□□□□ -0.28
HDAC6-235ENST00000495515 HOXA1P49639 335 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-235ENST00000495515 WT1-ASQ06250 92 aa13.31□□□□□ -0.28
HDAC6-235ENST00000495515 GGNBP1Q5YKI7 109 aa13.31□□□□□ -0.28
HDAC6-235ENST00000495515 NECAP1Q8NC96 275 aa13.31□□□□□ -0.28
HDAC6-235ENST00000495515 OR52B4Q8NGK2 314 aa13.31□□□□□ -0.28
HDAC6-235ENST00000495515 MARVELD1Q9BSK0 173 aa13.31□□□□□ -0.28
HDAC6-235ENST00000495515 TRBV9A0A0B4J1U6 114 aa13.3□□□□□ -0.28
HDAC6-235ENST00000495515 INS-IGF2F8WCM5 200 aa13.3□□□□□ -0.28
HDAC6-235ENST00000495515 SNCAP37840 140 aa13.3□□□□□ -0.28
HDAC6-235ENST00000495515 RHOGP84095 191 aa13.3□□□□□ -0.28
HDAC6-235ENST00000495515 KIAA0141Q14154 515 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-235ENST00000495515 PDLIM3Q53GG5 364 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-235ENST00000495515 C12orf45Q8N5I9 185 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-235ENST00000495515 OR2C3Q8N628 320 aa13.3□□□□□ -0.28
HDAC6-235ENST00000495515 SEC22CQ9BRL7 303 aa13.3□□□□□ -0.28
HDAC6-235ENST00000495515 TET2Q6N021 2002 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-235ENST00000495515 CEBPZOSA8MTT3 80 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 OR2J3O76001 311 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 PRH1P02810 166 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 SUB1P53999 127 aaKnown RBP eCLIP13.29□□□□□ -0.28
HDAC6-235ENST00000495515 RUNX1Q01196 453 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 ATP5G2Q06055 141 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 KLK9Q2XQG4 91 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 SPINK9Q5DT21 86 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 FAM209BQ5JX69 171 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 C8orf86Q6ZUL3 223 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 FBXL7Q9UJT9 491 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 KLK9Q9UKQ9 250 aa13.29□□□□□ -0.28
HDAC6-235ENST00000495515 F11RQ9Y624 299 aaKnown RBP13.29□□□□□ -0.28
HDAC6-235ENST00000495515 SNRPGP15A8MWD9 76 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 FAM90A26D6RGX4 464 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 ADAP1O75689 374 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 PF4P02776 101 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 LGALS1P09382 135 aaKnown RBP13.28□□□□□ -0.28
HDAC6-235ENST00000495515 TNFRSF9Q07011 255 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 SLC25A24Q6NUK1 477 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 UXS1Q8NBZ7 420 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 ZNF114Q8NC26 417 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 OR1P1Q8NH06 330 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 FANCD2OSQ96PS1 177 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 OR5B12Q96R08 314 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 HIPK2Q9H2X6 1198 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 GNB4Q9HAV0 340 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 HEYLQ9NQ87 328 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-235ENST00000495515 HSPB7Q9UBY9 170 aa13.28□□□□□ -0.28
HDAC6-235ENST00000495515 IGLV11-55A0A075B6I3 123 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 PITX3O75364 302 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 MED6O75586 246 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 IGHV3-11P01762 117 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 MYCNOSP40205 109 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 RGS21Q2M5E4 152 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 C15orf32Q32M92 178 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 PRR31Q5SQ13 230 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 C18orf65Q6ZTR6 163 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 CXorf58Q96LI9 332 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 ANK2Q01484 3957 aa13.27□□□□□ -0.29
HDAC6-235ENST00000495515 I3L521 148 aa13.26□□□□□ -0.29
HDAC6-235ENST00000495515 CCL24O00175 119 aa13.26□□□□□ -0.29
HDAC6-235ENST00000495515 TSPAN15O95858 294 aa13.26□□□□□ -0.29
HDAC6-235ENST00000495515 C19orf35Q6ZS72 473 aa13.26□□□□□ -0.29
HDAC6-235ENST00000495515 DPF1Q92782 380 aa13.26□□□□□ -0.29
HDAC6-235ENST00000495515 P2RX4Q99571 388 aa13.26□□□□□ -0.29
HDAC6-235ENST00000495515 CORTO00230 105 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 NXPH3O95157 252 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 NDUFB8O95169 186 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 LY86O95711 162 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 HTR2BP41595 481 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 EXOSC2Q13868 293 aaKnown RBP13.25□□□□□ -0.29
HDAC6-235ENST00000495515 IAH1Q2TAA2 248 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-235ENST00000495515 ZNF343Q6P1L6 599 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 NOXA1Q86UR1 476 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 OR11H1Q8NG94 326 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 OR1N2Q8NGR9 330 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 DTD1Q8TEA8 209 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 EEF1AKMT3Q96AZ1 226 aa13.25□□□□□ -0.29
HDAC6-235ENST00000495515 RANGRFQ9HD47 186 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-235ENST00000495515 HSPB1P04792 205 aaKnown RBP13.24□□□□□ -0.29
HDAC6-235ENST00000495515 SPNP16150 400 aa13.24□□□□□ -0.29
HDAC6-235ENST00000495515 DEFA5Q01523 94 aa13.24□□□□□ -0.29
HDAC6-235ENST00000495515 ZNF616Q08AN1 781 aa13.24□□□□□ -0.29
HDAC6-235ENST00000495515 DEFB136Q30KP8 78 aa13.24□□□□□ -0.29
HDAC6-235ENST00000495515 VN1R17PQ8TDU5 208 aa13.24□□□□□ -0.29
HDAC6-235ENST00000495515 RAX2Q96IS3 184 aa13.24□□□□□ -0.29
HDAC6-235ENST00000495515 CIB3Q96Q77 187 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-235ENST00000495515 RBKSQ9H477 322 aa13.24□□□□□ -0.29
HDAC6-235ENST00000495515 PEF1Q9UBV8 284 aaKnown RBP13.24□□□□□ -0.29
HDAC6-235ENST00000495515 TRBV7-1A0A0A6YYK4 115 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 C5orf51A6NDU8 294 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 FAM25EA8MYX2 175 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 LINC01619G3V211 115 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 WRBO00258 174 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 OR8U8P0C7N1 319 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 NKX2-1P43699 371 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-235ENST00000495515 ATP5IP56385 69 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-235ENST00000495515 TREML4Q6UXN2 200 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 GSG1LQ6UXU4 331 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 SLC24A4Q8NFF2 622 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 MISP3Q96FF7 219 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 GSKIPQ9P0R6 139 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms