RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 IGLL1P15814 213 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 RAP2BP61225 183 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 ERVK-16P61578 105 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 CYCSP99999 105 aaKnown RBP13.26□□□□□ -0.29
SNX17-209ENST00000494893 DEFA5Q01523 94 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 FHL3Q13643 280 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 BEAN1Q3B7T3 259 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 C19orf35Q6ZS72 473 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 WDR89Q96FK6 387 aaPredicted RBP13.26□□□□□ -0.29
SNX17-209ENST00000494893 TMEM68Q96MH6 324 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 SPIN2AQ99865 258 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 SPIN2BQ9BPZ2 258 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 PDCD10Q9BUL8 212 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 TMEM140Q9NV12 185 aa13.26□□□□□ -0.29
SNX17-209ENST00000494893 A0A1B0GU03 582 aa13.25□□□□□ -0.29
SNX17-209ENST00000494893 BRI3O95415 125 aa13.25□□□□□ -0.29
SNX17-209ENST00000494893 CD33P20138 364 aa13.25□□□□□ -0.29
SNX17-209ENST00000494893 MAS1LP35410 378 aa13.25□□□□□ -0.29
SNX17-209ENST00000494893 RPL27AP46776 148 aaKnown RBP13.25□□□□□ -0.29
SNX17-209ENST00000494893 RPL8P62917 257 aaKnown RBP13.25□□□□□ -0.29
SNX17-209ENST00000494893 IL15RAQ13261 267 aa13.25□□□□□ -0.29
SNX17-209ENST00000494893 IAH1Q2TAA2 248 aaPredicted RBP13.25□□□□□ -0.29
SNX17-209ENST00000494893 KPRPQ5T749 579 aaPredicted RBP13.25□□□□□ -0.29
SNX17-209ENST00000494893 H2BFWTQ7Z2G1 175 aa13.25□□□□□ -0.29
SNX17-209ENST00000494893 TCTE3Q8IZS6 198 aa13.25□□□□□ -0.29
SNX17-209ENST00000494893 ZBTB8BQ8NAP8 495 aaPredicted RBP13.25□□□□□ -0.29
SNX17-209ENST00000494893 DMBX1Q8NFW5 382 aa13.25□□□□□ -0.29
SNX17-209ENST00000494893 OR4A5Q8NH83 315 aa13.25□□□□□ -0.29
SNX17-209ENST00000494893 FYTTD1Q96QD9 318 aaKnown RBP13.25□□□□□ -0.29
SNX17-209ENST00000494893 NMES1Q9C002 83 aa13.25□□□□□ -0.29
SNX17-209ENST00000494893 H3BUA1 57 aa13.24□□□□□ -0.29
SNX17-209ENST00000494893 IGHV3-11P01762 117 aa13.24□□□□□ -0.29
SNX17-209ENST00000494893 TRGV3P03979 118 aa13.24□□□□□ -0.29
SNX17-209ENST00000494893 OR9G9P0C7N8 305 aa13.24□□□□□ -0.29
SNX17-209ENST00000494893 TPPP2P59282 170 aa13.24□□□□□ -0.29
SNX17-209ENST00000494893 CD300CQ08708 224 aa13.24□□□□□ -0.29
SNX17-209ENST00000494893 IZUMO4Q1ZYL8 232 aa13.24□□□□□ -0.29
SNX17-209ENST00000494893 THOC7Q6I9Y2 204 aaKnown RBP13.24□□□□□ -0.29
SNX17-209ENST00000494893 Q6ZRM9 215 aa13.24□□□□□ -0.29
SNX17-209ENST00000494893 SLA2Q9H6Q3 261 aa13.24□□□□□ -0.29
SNX17-209ENST00000494893 GSKIPQ9P0R6 139 aa13.24□□□□□ -0.29
SNX17-209ENST00000494893 NOTCH3Q9UM47 2321 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 PITX3O75364 302 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 ACTL6BO94805 426 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 PRH1P02810 166 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 LGALS1P09382 135 aaKnown RBP13.23□□□□□ -0.29
SNX17-209ENST00000494893 AREGP15514 252 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 OR2B8PP59922 312 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 SMCO1Q147U7 214 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 TTC9CQ8N5M4 171 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 OR11H1Q8NG94 326 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 ZNF355PQ9NSJ1 428 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 COA4Q9NYJ1 87 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 CACNG5Q9UF02 275 aa13.23□□□□□ -0.29
SNX17-209ENST00000494893 DEFA6Q01524 100 aa13.22□□□□□ -0.29
SNX17-209ENST00000494893 OR4D5Q8NGN0 318 aa13.22□□□□□ -0.29
SNX17-209ENST00000494893 OR1N2Q8NGR9 330 aa13.22□□□□□ -0.29
SNX17-209ENST00000494893 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.22□□□□□ -0.29
SNX17-209ENST00000494893 NSG2Q9Y328 171 aa13.22□□□□□ -0.29
SNX17-209ENST00000494893 IGHV4OR15-8A0A075B7B6 117 aa13.21□□□□□ -0.29
SNX17-209ENST00000494893 A0A087WW49 117 aa13.21□□□□□ -0.29
SNX17-209ENST00000494893 TRBV9A0A0B4J1U6 114 aa13.21□□□□□ -0.29
SNX17-209ENST00000494893 FGF2P09038 288 aa13.21□□□□□ -0.29
SNX17-209ENST00000494893 OR2T35Q8NGX2 323 aa13.21□□□□□ -0.29
SNX17-209ENST00000494893 OR1S1Q8NH92 325 aa13.21□□□□□ -0.29
SNX17-209ENST00000494893 PPP1R1CQ8WVI7 109 aa13.21□□□□□ -0.29
SNX17-209ENST00000494893 RCC1LQ96I51 464 aaKnown RBP13.21□□□□□ -0.29
SNX17-209ENST00000494893 TEX50A0A1B0GTY4 177 aa13.2□□□□□ -0.3
SNX17-209ENST00000494893 IGLC7A0M8Q6 106 aa13.2□□□□□ -0.3
SNX17-209ENST00000494893 NPIPB5A8MRT5 1133 aa13.2□□□□□ -0.3
SNX17-209ENST00000494893 SNAPC5O75971 98 aa13.2□□□□□ -0.3
SNX17-209ENST00000494893 CRYGCP07315 174 aa13.2□□□□□ -0.3
SNX17-209ENST00000494893 ZNF616Q08AN1 781 aa13.2□□□□□ -0.3
SNX17-209ENST00000494893 PPP1R14BQ96C90 147 aa13.2□□□□□ -0.3
SNX17-209ENST00000494893 FANCD2OSQ96PS1 177 aa13.2□□□□□ -0.3
SNX17-209ENST00000494893 G3V3Q6 166 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 SMLR1H3BR10 107 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 REG1AP05451 166 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 CTRB1P17538 263 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 PSMB6P28072 239 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 NKX2-1P43699 371 aaPredicted RBP13.19□□□□□ -0.3
SNX17-209ENST00000494893 SLURP1P55000 103 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 RHOGP84095 191 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 ID3Q02535 119 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 FGL1Q08830 312 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 KLK9Q2XQG4 91 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 AARDQ4LEZ3 155 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 Q5BKY6 102 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 CTRB2Q6GPI1 263 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 OR10W1Q8NGF6 305 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 OR4A16Q8NH70 328 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 KLK9Q9UKQ9 250 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 ZNF257Q9Y2Q1 563 aa13.19□□□□□ -0.3
SNX17-209ENST00000494893 TRAV14DV4A0A0A6YYC5 116 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 FAM90A26D6RGX4 464 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 ST8SIA3O43173 380 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 MPC2O95563 127 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 SCGB1D2O95969 90 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 TRBV12-3P01733 135 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 MBPP02686 304 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms