RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ERHP84090 104 aaKnown RBP12.22□□□□□ -0.45
LIME1-209ENST00000494776 PRCDQ00LT1 54 aa12.22□□□□□ -0.45
LIME1-209ENST00000494776 DEFB121Q5J5C9 76 aa12.22□□□□□ -0.45
LIME1-209ENST00000494776 TMEM268Q5VZI3 342 aa12.22□□□□□ -0.45
LIME1-209ENST00000494776 CLEC19AQ6UXS0 136 aa12.22□□□□□ -0.45
LIME1-209ENST00000494776 TMED4Q7Z7H5 227 aa12.22□□□□□ -0.45
LIME1-209ENST00000494776 SLC35G3Q8N808 338 aa12.22□□□□□ -0.45
LIME1-209ENST00000494776 OR1L6Q8NGR2 347 aa12.22□□□□□ -0.45
LIME1-209ENST00000494776 PLEKHA3Q9HB20 300 aa12.22□□□□□ -0.45
LIME1-209ENST00000494776 F11RQ9Y624 299 aaKnown RBP12.22□□□□□ -0.45
LIME1-209ENST00000494776 TGP01266 2768 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 A0A0B4J293 547 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 LINC00854A0A1B0GVQ3 168 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 MFSD2BA6NFX1 497 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 GGCTO75223 188 aaKnown RBP12.21□□□□□ -0.45
LIME1-209ENST00000494776 LY86O95711 162 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 ARL3P36405 182 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 BAK1Q16611 211 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 KLK9Q2XQG4 91 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 SPINK9Q5DT21 86 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 FAM219AQ8IW50 185 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
LIME1-209ENST00000494776 OR9G4Q8NGQ1 327 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 TMEM230Q96A57 120 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 SLC25A21Q9BQT8 299 aaPredicted RBP12.21□□□□□ -0.45
LIME1-209ENST00000494776 ENY2Q9NPA8 101 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 KLK9Q9UKQ9 250 aa12.21□□□□□ -0.45
LIME1-209ENST00000494776 WI2-2373I1.2A0A1W2PRP0 233 aa12.2□□□□□ -0.46
LIME1-209ENST00000494776 ST8SIA3O43173 380 aa12.2□□□□□ -0.46
LIME1-209ENST00000494776 P0C879 139 aa12.2□□□□□ -0.46
LIME1-209ENST00000494776 LHFPL5Q8TAF8 219 aa12.2□□□□□ -0.46
LIME1-209ENST00000494776 GALNT14Q96FL9 552 aa12.2□□□□□ -0.46
LIME1-209ENST00000494776 CCDC140Q96MF4 163 aa12.2□□□□□ -0.46
LIME1-209ENST00000494776 PEMTQ9UBM1 199 aa12.2□□□□□ -0.46
LIME1-209ENST00000494776 DMRT1Q9Y5R6 373 aa12.2□□□□□ -0.46
LIME1-209ENST00000494776 PRKDCP78527 4128 aaKnown RBP12.19□□□□□ -0.46
LIME1-209ENST00000494776 A0A0G2JRQ6 117 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 NAP1L6A6NFF2 107 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 CENPXA8MT69 81 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 K7EIL1 84 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 OR2C1O95371 312 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 HLA-AP01891 365 aaKnown RBP12.19□□□□□ -0.46
LIME1-209ENST00000494776 CLEC3BP05452 202 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 SNCAP37840 140 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 HOXA1P49639 335 aaPredicted RBP12.19□□□□□ -0.46
LIME1-209ENST00000494776 TMEM187Q14656 261 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 OR2C3Q8N628 320 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 OR1P1Q8NH06 330 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 VN1R17PQ8TDU5 208 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 IL22RA2Q969J5 263 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 MISP3Q96FF7 219 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 PRR25Q96S07 402 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 ZC4H2Q9NQZ6 224 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.19□□□□□ -0.46
LIME1-209ENST00000494776 PRR13Q9NZ81 148 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 ZNF256Q9Y2P7 627 aaPredicted RBP12.19□□□□□ -0.46
LIME1-209ENST00000494776 TMEM56-RWDD3S4R434 201 aa12.19□□□□□ -0.46
LIME1-209ENST00000494776 IGHV3-21A0A0B4J1V1 117 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 VAMP1P23763 118 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 GPR183P32249 361 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 CCR6P51684 374 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 MFAP2P55001 183 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 SRPXP78539 464 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 RBMS2Q15434 407 aaKnown RBP12.18□□□□□ -0.46
LIME1-209ENST00000494776 FAM106AQ4KMX7 169 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 TMEM128Q5BJH2 165 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 LGI3Q8N145 548 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 ZNF502Q8TBZ5 544 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 SDHCQ99643 169 aaPredicted RBP12.18□□□□□ -0.46
LIME1-209ENST00000494776 CACNG5Q9UF02 275 aa12.18□□□□□ -0.46
LIME1-209ENST00000494776 PIGBOS1A0A0B4J2F0 54 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 ZNF320A2RRD8 509 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 A6NHS1 94 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 IL7P13232 177 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 SUB1P53999 127 aaKnown RBP eCLIP12.17□□□□□ -0.46
LIME1-209ENST00000494776 SUPT4H1P63272 117 aaKnown RBP12.17□□□□□ -0.46
LIME1-209ENST00000494776 DCTN2Q13561 401 aaKnown RBP12.17□□□□□ -0.46
LIME1-209ENST00000494776 CNPY1Q3B7I2 92 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 PLET1Q6UQ28 207 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 Q6ZRM9 215 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 CENPSQ8N2Z9 138 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 UBAC2Q8NBM4 344 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 GPR146Q96CH1 333 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 C21orf62Q9NYP8 219 aa12.17□□□□□ -0.46
LIME1-209ENST00000494776 OR2T8A6NH00 312 aa12.16□□□□□ -0.46
LIME1-209ENST00000494776 SULT1A3P0DMM9 295 aa12.16□□□□□ -0.46
LIME1-209ENST00000494776 SULT1A4P0DMN0 295 aa12.16□□□□□ -0.46
LIME1-209ENST00000494776 SPNP16150 400 aa12.16□□□□□ -0.46
LIME1-209ENST00000494776 SPCS3P61009 180 aa12.16□□□□□ -0.46
LIME1-209ENST00000494776 Q56UQ5 140 aa12.16□□□□□ -0.46
LIME1-209ENST00000494776 HAPLN4Q86UW8 402 aa12.16□□□□□ -0.46
LIME1-209ENST00000494776 GPHB5Q86YW7 130 aa12.16□□□□□ -0.46
LIME1-209ENST00000494776 ZNF114Q8NC26 417 aa12.16□□□□□ -0.46
LIME1-209ENST00000494776 SCARB1Q8WTV0 552 aa12.16□□□□□ -0.46
LIME1-209ENST00000494776 PINX1Q96BK5 328 aaKnown RBP12.16□□□□□ -0.46
LIME1-209ENST00000494776 C7orf50Q9BRJ6 194 aaKnown RBP12.16□□□□□ -0.46
LIME1-209ENST00000494776 A0A0B4J2A0 478 aa12.15□□□□□ -0.46
LIME1-209ENST00000494776 CEBPZOSA8MTT3 80 aa12.15□□□□□ -0.46
LIME1-209ENST00000494776 TGOLN2O43493 480 aa12.15□□□□□ -0.46
LIME1-209ENST00000494776 CSN3P07498 182 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms