RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CA1P00915 261 aaPredicted RBP12.58□□□□□ -0.4
SDF4-207ENST00000494748 PPOXP50336 477 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 PTTG1IPP53801 180 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 MBD6Q96DN6 1003 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 CXXC4Q9H2H0 198 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 FOXA2Q9Y261 457 aaPredicted RBP12.58□□□□□ -0.4
SDF4-207ENST00000494748 COX11Q9Y6N1 276 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 C20orf202A1L168 122 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 K7EP13 123 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 IGHV3-13P01766 116 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 IGHV3-7P01780 117 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 EBLN2Q6P2I7 272 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 JPT1Q9UK76 154 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 CFIP05156 583 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 SPACA3Q8IXA5 215 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 WIPF2Q8TF74 440 aaPredicted RBP12.58□□□□□ -0.4
SDF4-207ENST00000494748 FAM216AQ8WUB2 273 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 NABP2Q9BQ15 211 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 SPRR3Q9UBC9 169 aa12.58□□□□□ -0.4
SDF4-207ENST00000494748 IZUMO1RA6ND01 250 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 FNDC10F2Z333 226 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 TBR1Q16650 682 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 GCNT2Q8N0V5 402 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 KLF3P57682 345 aaPredicted RBP12.57□□□□□ -0.4
SDF4-207ENST00000494748 SELENOVP59797 346 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 UBE2V1Q13404 147 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 EDDM3AQ14507 147 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 TNXAQ16473 311 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 IBA57Q5T440 356 aaKnown RBP12.57□□□□□ -0.4
SDF4-207ENST00000494748 LYG1Q8N1E2 194 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 PNKDQ8N490 385 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 TMEM167BQ9NRX6 74 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 H0YJW9 148 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 APCSP02743 223 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 HINT1P49773 126 aaPredicted RBP12.57□□□□□ -0.4
SDF4-207ENST00000494748 ERVK-16P61578 105 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 OR4A47Q6IF82 309 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 TRAT1Q6PIZ9 186 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 IDI2-AS1Q9NZ38 188 aa12.57□□□□□ -0.4
SDF4-207ENST00000494748 MUC3AQ02505 3323 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 TNCP24821 2201 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 ABCA1O95477 2261 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 DSCAMO60469 2012 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 IGKV1D-17A0A075B6S4 117 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 MRPL49Q13405 166 aaKnown RBP12.56□□□□□ -0.4
SDF4-207ENST00000494748 ABHD17BQ5VST6 288 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 C2orf70A6NJV1 201 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 F2RL2O00254 374 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 GATA2P23769 480 aaPredicted RBP12.56□□□□□ -0.4
SDF4-207ENST00000494748 MEOX1P50221 254 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 LEMD1Q68G75 181 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 OR8B3Q8NGG8 313 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 OR8B2Q96RD0 313 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 HEATR1Q9H583 2144 aaKnown RBP12.56□□□□□ -0.4
SDF4-207ENST00000494748 ZDBF2Q9HCK1 2354 aa12.56□□□□□ -0.4
SDF4-207ENST00000494748 IGLC7A0M8Q6 106 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 SMIM21Q3B7S5 101 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 TIGITQ495A1 244 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 KIR3DL3Q8N743 410 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 URB1-AS1Q96HZ7 61 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 S1PR3Q99500 378 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 PSMB11A5LHX3 300 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 FAM181BA6NEQ2 426 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 LYZL6O75951 148 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 HSPE1P61604 102 aaKnown RBP12.55□□□□□ -0.4
SDF4-207ENST00000494748 KLF5Q13887 457 aaPredicted RBP12.55□□□□□ -0.4
SDF4-207ENST00000494748 MORN5Q5VZ52 161 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 LINC00696Q6ZRV3 163 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 GNG12Q9UBI6 72 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 PCNX2A6NKB5 2137 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 IGHV2OR16-5A0A0B4J2B6 119 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 IGLL1P15814 213 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 PRDX2P32119 198 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 RNFT1Q5M7Z0 435 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 KLHDC1Q8N7A1 406 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 MDS2Q8NDY4 140 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 MAFAQ8NHW3 353 aaPredicted RBP12.55□□□□□ -0.4
SDF4-207ENST00000494748 GAL3ST2Q9H3Q3 398 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 TP73-AS1Q9UF72 201 aa12.55□□□□□ -0.4
SDF4-207ENST00000494748 NTF3P20783 257 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 USF1P22415 310 aaPredicted RBP12.54□□□□□ -0.4
SDF4-207ENST00000494748 ARG2P78540 354 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 FAM120AOSQ5T036 256 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 PEAR1Q5VY43 1037 aaPredicted RBP12.54□□□□□ -0.4
SDF4-207ENST00000494748 STUMQ69YW2 141 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 MUC15Q8N387 334 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 NHLRC2Q8NBF2 726 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 FAM167A-AS1Q96KT0 104 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 FZR1Q9UM11 496 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 CGB3P0DN86 165 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 CGB7P0DN87 165 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 DUSP3P51452 185 aaPredicted RBP12.54□□□□□ -0.4
SDF4-207ENST00000494748 LINC00479Q96M42 142 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 RAI1Q7Z5J4 1906 aaPredicted RBP12.54□□□□□ -0.4
SDF4-207ENST00000494748 TRAV9-2A0A087WT02 112 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 VWC2LB2RUY7 222 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 C21orf140B9A014 251 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 OR5B3Q8NH48 314 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 LEAP2Q969E1 77 aa12.54□□□□□ -0.4
SDF4-207ENST00000494748 SSBP3Q9BWW4 388 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms