RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 COMPP49747 757 aaPredicted RBP16.41■□□□□ 0.22
KPNA1-210ENST00000494339 ATP6V1FQ16864 119 aa16.41■□□□□ 0.22
KPNA1-210ENST00000494339 LRRC75BQ2VPJ9 315 aa16.41■□□□□ 0.22
KPNA1-210ENST00000494339 TMEM219Q86XT9 240 aa16.41■□□□□ 0.22
KPNA1-210ENST00000494339 LILRB2Q8N423 598 aa16.41■□□□□ 0.22
KPNA1-210ENST00000494339 PINX1Q96BK5 328 aaKnown RBP16.41■□□□□ 0.22
KPNA1-210ENST00000494339 MAS1LP35410 378 aa16.41■□□□□ 0.22
KPNA1-210ENST00000494339 RPL27AP46776 148 aaKnown RBP16.41■□□□□ 0.22
KPNA1-210ENST00000494339 SSBP2P81877 361 aaPredicted RBP16.41■□□□□ 0.22
KPNA1-210ENST00000494339 KRTAP1-1Q07627 177 aa16.41■□□□□ 0.22
KPNA1-210ENST00000494339 OR8G2PQ6IF36 304 aa16.41■□□□□ 0.22
KPNA1-210ENST00000494339 HAPLN4Q86UW8 402 aa16.41■□□□□ 0.22
KPNA1-210ENST00000494339 C15orf62A8K5M9 175 aa16.4■□□□□ 0.22
KPNA1-210ENST00000494339 H3BUX3 64 aa16.4■□□□□ 0.22
KPNA1-210ENST00000494339 RAB5CP51148 216 aa16.4■□□□□ 0.22
KPNA1-210ENST00000494339 SLC38A11Q08AI6 406 aa16.4■□□□□ 0.22
KPNA1-210ENST00000494339 ARL16Q0P5N6 197 aa16.4■□□□□ 0.22
KPNA1-210ENST00000494339 DEFB112Q30KQ8 113 aa16.4■□□□□ 0.22
KPNA1-210ENST00000494339 OR10P1Q8NGE3 313 aa16.4■□□□□ 0.22
KPNA1-210ENST00000494339 PARD6GQ9BYG4 376 aaPredicted RBP16.4■□□□□ 0.22
KPNA1-210ENST00000494339 C1RLQ9NZP8 487 aa16.4■□□□□ 0.22
KPNA1-210ENST00000494339 ZNF705EA8MWA4 302 aaPredicted RBP16.39■□□□□ 0.21
KPNA1-210ENST00000494339 CNIH1O95406 144 aa16.39■□□□□ 0.21
KPNA1-210ENST00000494339 APELAP0DMC3 54 aa16.39■□□□□ 0.21
KPNA1-210ENST00000494339 BLOC1S1P78537 153 aa16.39■□□□□ 0.21
KPNA1-210ENST00000494339 Q8N9W7 124 aa16.39■□□□□ 0.21
KPNA1-210ENST00000494339 SLC24A4Q8NFF2 622 aa16.39■□□□□ 0.21
KPNA1-210ENST00000494339 ATP6V0CP27449 155 aa16.39■□□□□ 0.21
KPNA1-210ENST00000494339 LY6EQ16553 131 aa16.39■□□□□ 0.21
KPNA1-210ENST00000494339 SLC25A24Q6NUK1 477 aa16.39■□□□□ 0.21
KPNA1-210ENST00000494339 IL17RELQ6ZVW7 336 aa16.39■□□□□ 0.21
KPNA1-210ENST00000494339 TMEM170AQ8WVE7 144 aa16.39■□□□□ 0.21
KPNA1-210ENST00000494339 SRSF12Q8WXF0 261 aaKnown RBP16.39■□□□□ 0.21
KPNA1-210ENST00000494339 A0A1W2PN81 502 aa16.38■□□□□ 0.21
KPNA1-210ENST00000494339 PMS2P5A8MQ11 134 aa16.38■□□□□ 0.21
KPNA1-210ENST00000494339 CHRNA7P36544 502 aa16.38■□□□□ 0.21
KPNA1-210ENST00000494339 WT1-ASQ06250 92 aa16.38■□□□□ 0.21
KPNA1-210ENST00000494339 SCGB1C1Q8TD33 95 aa16.38■□□□□ 0.21
KPNA1-210ENST00000494339 SLC25A33Q9BSK2 321 aa16.38■□□□□ 0.21
KPNA1-210ENST00000494339 CD5LO43866 347 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 OR8U8P0C7N1 319 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 NPY1RP25929 384 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 SH3BGRL3Q9H299 93 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 SONP18583 2426 aaKnown RBP16.37■□□□□ 0.21
KPNA1-210ENST00000494339 MFSD2BA6NFX1 497 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 UMAD1C9J7I0 102 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 TRIM77I1YAP6 450 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 REG1AP05451 166 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 OR13C7P0DN81 318 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 SNCAP37840 140 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 ERHP84090 104 aaKnown RBP16.37■□□□□ 0.21
KPNA1-210ENST00000494339 FXYD3Q14802 87 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 HSD17B13Q7Z5P4 300 aaPredicted RBP16.37■□□□□ 0.21
KPNA1-210ENST00000494339 OR2G3Q8NGZ4 309 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 RBM14Q96PK6 669 aaKnown RBP16.37■□□□□ 0.21
KPNA1-210ENST00000494339 RASL11BQ9BPW5 248 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 TMEM147Q9BVK8 224 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 PLA2G2EQ9NZK7 142 aa16.37■□□□□ 0.21
KPNA1-210ENST00000494339 IGLC7A0M8Q6 106 aa16.36■□□□□ 0.21
KPNA1-210ENST00000494339 NUDT19A8MXV4 375 aa16.36■□□□□ 0.21
KPNA1-210ENST00000494339 ATP5IP56385 69 aaPredicted RBP16.36■□□□□ 0.21
KPNA1-210ENST00000494339 RAB11AP62491 216 aa16.36■□□□□ 0.21
KPNA1-210ENST00000494339 C9orf139Q6ZV77 190 aa16.36■□□□□ 0.21
KPNA1-210ENST00000494339 EIF4E3Q8N5X7 224 aaKnown RBP16.36■□□□□ 0.21
KPNA1-210ENST00000494339 FAM103A1Q9BTL3 118 aaKnown RBP16.36■□□□□ 0.21
KPNA1-210ENST00000494339 PARP11Q9NR21 331 aa16.36■□□□□ 0.21
KPNA1-210ENST00000494339 YAE1D1Q9NRH1 226 aa16.36■□□□□ 0.21
KPNA1-210ENST00000494339 ANKRD34BA5PLL1 514 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 TEX22C9J3V5 150 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 IFNA4P05014 189 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 AREGP15514 252 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 CX3CL1P78423 397 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 SPNS3Q6ZMD2 512 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 SSMEM1Q8WWF3 244 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 SH2D7A6NKC9 451 aaPredicted RBP16.35■□□□□ 0.21
KPNA1-210ENST00000494339 INS-IGF2F8WCM5 200 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 AANATQ16613 207 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 ZNF562Q6V9R5 426 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 ETV3LQ6ZN32 361 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 FAM210AQ96ND0 272 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 UQCC1Q9NVA1 299 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 MOB4Q9Y3A3 225 aa16.35■□□□□ 0.21
KPNA1-210ENST00000494339 IGHV4-59P01825 116 aa16.34■□□□□ 0.21
KPNA1-210ENST00000494339 RNASE2P10153 161 aaKnown RBP16.34■□□□□ 0.21
KPNA1-210ENST00000494339 NDPQ00604 133 aa16.34■□□□□ 0.21
KPNA1-210ENST00000494339 VWC2Q2TAL6 325 aa16.34■□□□□ 0.21
KPNA1-210ENST00000494339 PXDC1Q5TGL8 231 aa16.34■□□□□ 0.21
KPNA1-210ENST00000494339 C5orf56Q8N8D9 126 aa16.34■□□□□ 0.21
KPNA1-210ENST00000494339 ABHD5Q8WTS1 349 aa16.34■□□□□ 0.21
KPNA1-210ENST00000494339 PSMG3Q9BT73 122 aaPredicted RBP16.34■□□□□ 0.21
KPNA1-210ENST00000494339 GGACTQ9BVM4 153 aa16.34■□□□□ 0.21
KPNA1-210ENST00000494339 WDR61Q9GZS3 305 aaKnown RBP16.34■□□□□ 0.21
KPNA1-210ENST00000494339 A6NDX4 124 aa16.33■□□□□ 0.21
KPNA1-210ENST00000494339 TUSC1Q2TAM9 212 aa16.33■□□□□ 0.21
KPNA1-210ENST00000494339 BSXQ3C1V8 233 aa16.33■□□□□ 0.21
KPNA1-210ENST00000494339 ARPC1AQ92747 370 aa16.33■□□□□ 0.21
KPNA1-210ENST00000494339 MARC2Q969Z3 335 aa16.33■□□□□ 0.21
KPNA1-210ENST00000494339 ZNF48Q96MX3 618 aaPredicted RBP16.33■□□□□ 0.21
KPNA1-210ENST00000494339 HSPB9Q9BQS6 159 aa16.33■□□□□ 0.21
KPNA1-210ENST00000494339 IGHV7-81A0A0B4J1V7 117 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms