RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 HOXC5Q00444 222 aa3.04□□□□□ -1.92
SMC2-205ENST00000493955 BATFQ16520 125 aa3.04□□□□□ -1.92
SMC2-205ENST00000493955 ACSM3Q53FZ2 586 aa3.04□□□□□ -1.92
SMC2-205ENST00000493955 HCP5Q6MZN7 132 aa3.04□□□□□ -1.92
SMC2-205ENST00000493955 AMTNQ6UX39 209 aa3.04□□□□□ -1.92
SMC2-205ENST00000493955 C16orf78Q8WTQ4 265 aa3.04□□□□□ -1.92
SMC2-205ENST00000493955 STACQ99469 402 aa3.04□□□□□ -1.92
SMC2-205ENST00000493955 XPNPEP1Q9NQW7 623 aa3.04□□□□□ -1.92
SMC2-205ENST00000493955 FKBP14Q9NWM8 211 aa3.04□□□□□ -1.92
SMC2-205ENST00000493955 C19orf71A6NCJ1 209 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 E7EQL1 145 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 KCNK1O00180 336 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 NAA20P61599 178 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 PSG4Q00888 419 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 LRRC75BQ2VPJ9 315 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 PLPPR5Q32ZL2 321 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 C1orf194Q5T5A4 169 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 OR4K13Q8NH42 304 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 ASB17Q8WXJ9 295 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 CAPZA3Q96KX2 299 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 OR51I1Q9H343 314 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 C16orf95Q9H693 158 aa3.03□□□□□ -1.92
SMC2-205ENST00000493955 C5orf42Q9H799 3197 aa3.03□□□□□ -1.93
SMC2-205ENST00000493955 OR6C6A6NF89 314 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 SOD1P00441 154 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 HIST1H1EP10412 219 aaKnown RBP3.02□□□□□ -1.93
SMC2-205ENST00000493955 CEBPGP53567 150 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 EMX1Q04741 257 aaPredicted RBP3.02□□□□□ -1.93
SMC2-205ENST00000493955 BRD3OSQ6XYD6 125 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 AICDAQ9GZX7 198 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 LSM5Q9Y4Y9 91 aaKnown RBP3.02□□□□□ -1.93
SMC2-205ENST00000493955 BAZ2BQ9UIF8 2168 aaKnown RBP3.02□□□□□ -1.93
SMC2-205ENST00000493955 GRIFINA4D1Z8 144 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 C17orf51A8MQB3 221 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 DISC1C4P0D8 188 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 GOLGA6L19H0YKK7 550 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 APOMO95445 188 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 CCL3P10147 92 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 CPMP14384 443 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 UCHL3P15374 230 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 CRHBPP24387 322 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 RWDD2BP57060 319 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 TMEM176BQ3YBM2 270 aaPredicted RBP3.02□□□□□ -1.93
SMC2-205ENST00000493955 SFXN4Q6P4A7 337 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 ZNF322Q6U7Q0 402 aaPredicted RBP3.02□□□□□ -1.93
SMC2-205ENST00000493955 TCF24Q7RTU0 167 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 OR2T27Q8NH04 317 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 PPP1R14BQ96C90 147 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 DIRAS2Q96HU8 199 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 C8orf76Q96K31 380 aa3.02□□□□□ -1.93
SMC2-205ENST00000493955 WDFY4Q6ZS81 3184 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 BDP1A6H8Y1 2624 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 UBE2L6O14933 153 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 LGALS3P17931 250 aaKnown RBP3.01□□□□□ -1.93
SMC2-205ENST00000493955 CD200P41217 278 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 SERPINB10P48595 397 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 SAPCD1Q5SSQ6 148 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 C8orf74Q6P047 294 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 ZNF550Q7Z398 422 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 OR1M1Q8NGA1 313 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 OR5C1Q8NGR4 320 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 PHOSPHO2Q8TCD6 241 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 C12orf43Q96C57 262 aaKnown RBP3.01□□□□□ -1.93
SMC2-205ENST00000493955 LRRC19Q9H756 370 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 TXNL4BQ9NX01 149 aaKnown RBP3.01□□□□□ -1.93
SMC2-205ENST00000493955 Q9Y3F1 56 aa3.01□□□□□ -1.93
SMC2-205ENST00000493955 FANCMQ8IYD8 2048 aa3□□□□□ -1.93
SMC2-205ENST00000493955 PATJQ8NI35 1801 aa3□□□□□ -1.93
SMC2-205ENST00000493955 A0A0D9SFI3 127 aa3□□□□□ -1.93
SMC2-205ENST00000493955 IFNA16P05015 189 aa3□□□□□ -1.93
SMC2-205ENST00000493955 CDKN2CP42773 168 aa3□□□□□ -1.93
SMC2-205ENST00000493955 RAB5BP61020 215 aa3□□□□□ -1.93
SMC2-205ENST00000493955 PRDX4Q13162 271 aa3□□□□□ -1.93
SMC2-205ENST00000493955 HIST3H3Q16695 136 aa3□□□□□ -1.93
SMC2-205ENST00000493955 DAND5Q8N907 189 aa3□□□□□ -1.93
SMC2-205ENST00000493955 CCL13Q99616 98 aa3□□□□□ -1.93
SMC2-205ENST00000493955 OR11H12B2RN74 326 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 UBFD1O14562 309 aaKnown RBP2.99□□□□□ -1.93
SMC2-205ENST00000493955 TNNC2P02585 160 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 CCL1P22362 96 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 MAP2K4P45985 399 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 MARCKSL1P49006 195 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 SYPL2Q5VXT5 272 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 C5orf46Q6UWT4 87 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
SMC2-205ENST00000493955 OR11H2Q8NH07 326 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 GNPNAT1Q96EK6 184 aaPredicted RBP2.99□□□□□ -1.93
SMC2-205ENST00000493955 CCDC42Q96M95 316 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 ANAPC10Q9UM13 185 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 KLK5Q9Y337 293 aaPredicted RBP2.99□□□□□ -1.93
SMC2-205ENST00000493955 PXMP4Q9Y6I8 212 aa2.99□□□□□ -1.93
SMC2-205ENST00000493955 MYH9P35579 1960 aaKnown RBP2.98□□□□□ -1.93
SMC2-205ENST00000493955 LOC730098B7Z3J9 87 aa2.98□□□□□ -1.93
SMC2-205ENST00000493955 ZNF73O43830 326 aaPredicted RBP2.98□□□□□ -1.93
SMC2-205ENST00000493955 NDUFB2O95178 105 aa2.98□□□□□ -1.93
SMC2-205ENST00000493955 LYPLA2O95372 231 aa2.98□□□□□ -1.93
SMC2-205ENST00000493955 IGHV1-69P01742 117 aa2.98□□□□□ -1.93
SMC2-205ENST00000493955 RPS17P08708 135 aaKnown RBP2.98□□□□□ -1.93
SMC2-205ENST00000493955 SMIM10L2AP0DMW4 78 aa2.98□□□□□ -1.93
SMC2-205ENST00000493955 SMIM10L2BP0DMW5 78 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms