RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PLPPR2Q96GM1 343 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 GGTLC1Q9BX51 225 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 NMES1Q9C002 83 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 SLC25A15Q9Y619 301 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 POLQO75417 2590 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 C9orf118A6NHY6 69 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 DEFB108AA8MXU0 73 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 HRASP01112 189 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 KRASP01116 189 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 HLA-HP01893 362 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 HIST1H1DP16402 221 aaKnown RBP9.62□□□□□ -0.87
BRCA1-222ENST00000493919 CDAP32320 146 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 KLRD1Q13241 179 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 ZNF684Q5T5D7 378 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 SPSB3Q6PJ21 355 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 DNM1P46Q6ZS02 220 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 CMTM4Q8IZR5 234 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 WDR31Q8NA23 367 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 OR4K13Q8NH42 304 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 HS3ST6Q96QI5 342 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 SPIN2AQ99865 258 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 SPIN2BQ9BPZ2 258 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 HES4Q9HCC6 221 aa9.62□□□□□ -0.87
BRCA1-222ENST00000493919 ABCA4P78363 2273 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 KBTBD11-OT1A0A1B0GTJ5 212 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 PFN1P07737 140 aaKnown RBP9.61□□□□□ -0.87
BRCA1-222ENST00000493919 SRP19P09132 144 aaKnown RBP9.61□□□□□ -0.87
BRCA1-222ENST00000493919 PSG4Q00888 419 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 BSPH1Q075Z2 132 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 DAZAP2Q15038 168 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-222ENST00000493919 LRRC75BQ2VPJ9 315 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 KIAA1644Q3SXP7 199 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 CEACAM19Q7Z692 300 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 ZNRF4Q8WWF5 429 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 NMNAT3Q96T66 252 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 MBNL3Q9NUK0 354 aaKnown RBP9.61□□□□□ -0.87
BRCA1-222ENST00000493919 KIAA1456Q9P272 454 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 NOTCH2Q04721 2471 aa9.61□□□□□ -0.87
BRCA1-222ENST00000493919 A0A0G2JK05 382 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 ZNF503-AS2A6NEH8 195 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 TMEM212A6NML5 194 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 H3BRM9 83 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 RENP00797 406 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 CTLA4P16410 223 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 KRTAP10-9P60411 292 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 GNB2P62879 340 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 SSBP1Q04837 148 aaKnown RBP9.6□□□□□ -0.87
BRCA1-222ENST00000493919 C10orf128Q5T292 105 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 SSX8Q7RTT4 187 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 SLC22A24Q8N4F4 322 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 Q8N976 141 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 OR51E1Q8TCB6 317 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 Q8TCH9 128 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 EHFQ9NZC4 300 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 CACNA1DQ01668 2161 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 C7orf71A4D174 169 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 RBFOX3A6NFN3 312 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 SYNGR1O43759 233 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 HLA-DRB1P01911 266 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 PATE4P0C8F1 98 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 EGR1P18146 543 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 C12orf73Q69YU5 71 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 SLC25A47Q6Q0C1 308 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 MDP1Q86V88 176 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 NR2C2APQ86WQ0 139 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 OR10P1Q8NGE3 313 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 AQP3Q92482 292 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 DERL3Q96Q80 235 aa9.6□□□□□ -0.87
BRCA1-222ENST00000493919 ANKRD17O75179 2603 aaKnown RBP9.59□□□□□ -0.87
BRCA1-222ENST00000493919 A0A1W2PPR1 153 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 ZNF850A8MQ14 1090 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 APOA2P02652 100 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 CD3EP07766 207 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 LINC00869P0C866 280 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 ZNF121P58317 390 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-222ENST00000493919 UBE2MP61081 183 aaKnown RBP9.59□□□□□ -0.87
BRCA1-222ENST00000493919 SLC35B1P78383 322 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 OTPQ5XKR4 325 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 ZNF627Q7L945 461 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 SYT8Q8NBV8 401 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 TMEM37Q8WXS4 190 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 MSI2Q96DH6 328 aaKnown RBP9.59□□□□□ -0.87
BRCA1-222ENST00000493919 SLC25A38Q96DW6 304 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 SGK494Q96LW2 274 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 GPER1Q99527 375 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 ELOVL3Q9HB03 270 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 PNRC2Q9NPJ4 139 aaKnown RBP9.59□□□□□ -0.87
BRCA1-222ENST00000493919 IL36GQ9NZH8 169 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 SLC25A10Q9UBX3 287 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-222ENST00000493919 LAMP3Q9UQV4 416 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 AKAP6Q13023 2319 aa9.59□□□□□ -0.87
BRCA1-222ENST00000493919 DPRXA6NFQ7 191 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 A6NIN4 97 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 RIIAD1A6NNX1 92 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 K7EN84 100 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 TMPRSS2O15393 492 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 PHF1O43189 567 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-222ENST00000493919 PLAUP00749 431 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 CRYGDP07320 174 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 CELA3BP08861 270 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms