RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 H3BUA1 57 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 IL5P05113 134 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 CDX1P47902 265 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 HOXA1P49639 335 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 MFAP2P55001 183 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 SPCS3P61009 180 aa13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 THOC7Q6I9Y2 204 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 C12orf45Q8N5I9 185 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-208ENST00000493815 PIGBOS1A0A0B4J2F0 54 aa13.87□□□□□ -0.19
PDLIM7-208ENST00000493815 C2orf68Q2NKX9 166 aa13.87□□□□□ -0.19
PDLIM7-208ENST00000493815 OR2C3Q8N628 320 aa13.87□□□□□ -0.19
PDLIM7-208ENST00000493815 UBE2E2Q96LR5 201 aa13.87□□□□□ -0.19
PDLIM7-208ENST00000493815 S4R3C0 116 aa13.87□□□□□ -0.19
PDLIM7-208ENST00000493815 TRBV9A0A0B4J1U6 114 aa13.86□□□□□ -0.19
PDLIM7-208ENST00000493815 CEBPZOSA8MTT3 80 aa13.86□□□□□ -0.19
PDLIM7-208ENST00000493815 M0QZ24 198 aa13.86□□□□□ -0.19
PDLIM7-208ENST00000493815 PITX3O75364 302 aa13.86□□□□□ -0.19
PDLIM7-208ENST00000493815 IFNA21P01568 189 aa13.86□□□□□ -0.19
PDLIM7-208ENST00000493815 HSD17B13Q7Z5P4 300 aaPredicted RBP13.86□□□□□ -0.19
PDLIM7-208ENST00000493815 OR52E5Q8NH55 327 aa13.86□□□□□ -0.19
PDLIM7-208ENST00000493815 OR10C1Q96KK4 312 aa13.86□□□□□ -0.19
PDLIM7-208ENST00000493815 P2RX4Q99571 388 aa13.86□□□□□ -0.19
PDLIM7-208ENST00000493815 NDUFB8O95169 186 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 DHFRP00374 187 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 TNFRSF9Q07011 255 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 RGS21Q2M5E4 152 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 SLC25A24Q6NUK1 477 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 C4orf3Q8WVX3 66 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 GPN1Q9HCN4 374 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 ENY2Q9NPA8 101 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 HSPB7Q9UBY9 170 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 FBXL7Q9UJT9 491 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 F11RQ9Y624 299 aaKnown RBP13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 IGLV11-55A0A075B6I3 123 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 C13orf42A0A1B0GVH6 325 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 FAM25EA8MYX2 175 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 BRI3O95415 125 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 IGHV3-23P01764 117 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 SLC25A6P12236 298 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 ERHP84090 104 aaKnown RBP13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 C15orf32Q32M92 178 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 NECAP1Q8NC96 275 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 RAX2Q96IS3 184 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 MAGT1Q9H0U3 335 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 RBKSQ9H477 322 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 PKD1L1Q8TDX9 2849 aa13.85□□□□□ -0.19
PDLIM7-208ENST00000493815 IGHV3-21A0A0B4J1V1 117 aa13.84□□□□□ -0.19
PDLIM7-208ENST00000493815 I3L521 148 aa13.84□□□□□ -0.19
PDLIM7-208ENST00000493815 PRAF2O60831 178 aa13.84□□□□□ -0.19
PDLIM7-208ENST00000493815 TATDN3Q17R31 274 aa13.84□□□□□ -0.19
PDLIM7-208ENST00000493815 IAH1Q2TAA2 248 aaPredicted RBP13.84□□□□□ -0.19
PDLIM7-208ENST00000493815 PDLIM3Q53GG5 364 aaPredicted RBP13.84□□□□□ -0.19
PDLIM7-208ENST00000493815 MRPL41Q8IXM3 137 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-208ENST00000493815 HEYLQ9NQ87 328 aaPredicted RBP13.84□□□□□ -0.19
PDLIM7-208ENST00000493815 WNK1Q9H4A3 2382 aa13.84□□□□□ -0.19
PDLIM7-208ENST00000493815 A0A0G2JLM5 398 aa13.83□□□□□ -0.2
PDLIM7-208ENST00000493815 ANKRD34BA5PLL1 514 aa13.83□□□□□ -0.2
PDLIM7-208ENST00000493815 FAM223BA6NKX1 122 aa13.83□□□□□ -0.2
PDLIM7-208ENST00000493815 SNCAP37840 140 aa13.83□□□□□ -0.2
PDLIM7-208ENST00000493815 ATP5G2Q06055 141 aa13.83□□□□□ -0.2
PDLIM7-208ENST00000493815 ETV3LQ6ZN32 361 aa13.83□□□□□ -0.2
PDLIM7-208ENST00000493815 FAM223AQ8IWN6 122 aa13.83□□□□□ -0.2
PDLIM7-208ENST00000493815 GSKIPQ9P0R6 139 aa13.83□□□□□ -0.2
PDLIM7-208ENST00000493815 SNRPGP15A8MWD9 76 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 TRBV12-3P01733 135 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 LGALS1P09382 135 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 OR11H1Q8NG94 326 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 OR4F17Q8NGA8 305 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 OR1P1Q8NH06 330 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 DTD1Q8TEA8 209 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 MISP3Q96FF7 219 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 USMG5Q96IX5 58 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 OR4F4Q96R69 305 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 C5orf51A6NDU8 294 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 MFSD2BA6NFX1 497 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 INS-IGF2F8WCM5 200 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 CCL24O00175 119 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 RNASE2P10153 161 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 IAPPP10997 89 aa13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 HIST1H1BP16401 226 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 EXOSC2Q13868 293 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-208ENST00000493815 SIX6O95475 246 aa13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 SCGB1D2O95969 90 aa13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 IGHV3-48P01763 117 aa13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 PF4P02776 101 aa13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 OXA1LQ15070 435 aa13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 KLK9Q2XQG4 91 aa13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 ZBTB8BQ8NAP8 495 aaPredicted RBP13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 ZNF114Q8NC26 417 aa13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 OR4D5Q8NGN0 318 aa13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 PINX1Q96BK5 328 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 KLK9Q9UKQ9 250 aa13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 ALG5Q9Y673 324 aa13.81□□□□□ -0.2
PDLIM7-208ENST00000493815 IGHV4OR15-8A0A075B7B6 117 aa13.8□□□□□ -0.2
PDLIM7-208ENST00000493815 A0A087WW49 117 aa13.8□□□□□ -0.2
PDLIM7-208ENST00000493815 GOSR2O14653 212 aa13.8□□□□□ -0.2
PDLIM7-208ENST00000493815 SSNA1O43805 119 aa13.8□□□□□ -0.2
PDLIM7-208ENST00000493815 POLR2GP62487 172 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDLIM7-208ENST00000493815 ZNF343Q6P1L6 599 aa13.8□□□□□ -0.2
PDLIM7-208ENST00000493815 OR1N2Q8NGR9 330 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms