RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 KANTRA0A1W2PQU2 76 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 M0QZK8 103 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 CST7O76096 145 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 ACTL6BO94805 426 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 METTL15P1P0C7V9 234 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 HTR2BP41595 481 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 CX3CL1P78423 397 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 IFITM2Q01629 132 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 FXYD3Q14802 87 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 C2orf83Q53S99 150 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 IL17RELQ6ZVW7 336 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 STOML3Q8TAV4 291 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 C22orf15Q8WYQ4 148 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 ARPC1AQ92747 370 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 HINT2Q9BX68 163 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 GON7Q9BXV9 100 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 WFDC1Q9HC57 220 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 ENY2Q9NPA8 101 aa10.01□□□□□ -0.81
VPS52-220ENST00000493674 EGR2P11161 476 aaPredicted RBP10□□□□□ -0.81
VPS52-220ENST00000493674 AREGP15514 252 aa10□□□□□ -0.81
VPS52-220ENST00000493674 NPY1RP25929 384 aa10□□□□□ -0.81
VPS52-220ENST00000493674 CRIP2P52943 208 aaPredicted RBP10□□□□□ -0.81
VPS52-220ENST00000493674 RPP30P78346 268 aaKnown RBP10□□□□□ -0.81
VPS52-220ENST00000493674 LY6EQ16553 131 aa10□□□□□ -0.81
VPS52-220ENST00000493674 ASPHD1Q5U4P2 390 aa10□□□□□ -0.81
VPS52-220ENST00000493674 SLC51BQ86UW2 128 aa10□□□□□ -0.81
VPS52-220ENST00000493674 MRPL41Q8IXM3 137 aaKnown RBP10□□□□□ -0.81
VPS52-220ENST00000493674 OR5C1Q8NGR4 320 aa10□□□□□ -0.81
VPS52-220ENST00000493674 SSMEM1Q8WWF3 244 aa10□□□□□ -0.81
VPS52-220ENST00000493674 RASL11BQ9BPW5 248 aa10□□□□□ -0.81
VPS52-220ENST00000493674 HSPB9Q9BQS6 159 aa10□□□□□ -0.81
VPS52-220ENST00000493674 ARV1Q9H2C2 271 aa10□□□□□ -0.81
VPS52-220ENST00000493674 VPREB3Q9UKI3 123 aa10□□□□□ -0.81
VPS52-220ENST00000493674 FBXO7Q9Y3I1 522 aa10□□□□□ -0.81
VPS52-220ENST00000493674 IFNA10P01566 189 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 OR13C7P0DN81 318 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 HNF1AP20823 631 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 MFAP2P55001 183 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 GNB1P62873 340 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 HBG1P69891 147 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 HBG2P69892 147 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 ERHP84090 104 aaKnown RBP9.99□□□□□ -0.81
VPS52-220ENST00000493674 VWC2Q2TAL6 325 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 KLK9Q2XQG4 91 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 C19orf54Q5BKX5 351 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 TMEM86BQ8N661 226 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 UBAC2Q8NBM4 344 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 OR1S2Q8NGQ3 325 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 P2RX4Q99571 388 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 SLA2Q9H6Q3 261 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 ZC4H2Q9NQZ6 224 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 ZNF580Q9UK33 172 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 KLK9Q9UKQ9 250 aa9.99□□□□□ -0.81
VPS52-220ENST00000493674 NPIPB5A8MRT5 1133 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 CNIH1O95406 144 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 IGHG2P01859 326 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 CRYGCP07315 174 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 OR8U8P0C7N1 319 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 CTRB1P17538 263 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 MDKP21741 143 aaPredicted RBP9.98□□□□□ -0.81
VPS52-220ENST00000493674 SRP14P37108 136 aaKnown RBP9.98□□□□□ -0.81
VPS52-220ENST00000493674 RAB11AP62491 216 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 UBA52P62987 128 aaKnown RBP9.98□□□□□ -0.81
VPS52-220ENST00000493674 SLC38A11Q08AI6 406 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 ATP6V1FQ16864 119 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 RPL7L1Q6DKI1 246 aaKnown RBP9.98□□□□□ -0.81
VPS52-220ENST00000493674 CTRB2Q6GPI1 263 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 TMEM217Q8N7C4 229 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 SIGLECL1Q8N7X8 197 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 OR1P1Q8NH06 330 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 SGMS2Q8NHU3 365 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 ATP5SQ99766 215 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 GGACTQ9BVM4 153 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 PARD6GQ9BYG4 376 aaPredicted RBP9.98□□□□□ -0.81
VPS52-220ENST00000493674 SMIM3Q9BZL3 60 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 DMRT1Q9Y5R6 373 aa9.98□□□□□ -0.81
VPS52-220ENST00000493674 F11RQ9Y624 299 aaKnown RBP9.98□□□□□ -0.81
VPS52-220ENST00000493674 FNDC10F2Z333 226 aa9.97□□□□□ -0.81
VPS52-220ENST00000493674 RGS13O14921 159 aa9.97□□□□□ -0.81
VPS52-220ENST00000493674 HOXA3O43365 443 aaPredicted RBP9.97□□□□□ -0.81
VPS52-220ENST00000493674 ATP6V1G1O75348 118 aa9.97□□□□□ -0.81
VPS52-220ENST00000493674 DFFBO76075 338 aa9.97□□□□□ -0.81
VPS52-220ENST00000493674 CFDP00746 253 aaPredicted RBP9.97□□□□□ -0.81
VPS52-220ENST00000493674 DLK1P80370 383 aa9.97□□□□□ -0.81
VPS52-220ENST00000493674 ETV3LQ6ZN32 361 aa9.97□□□□□ -0.81
VPS52-220ENST00000493674 TTC9CQ8N5M4 171 aa9.97□□□□□ -0.81
VPS52-220ENST00000493674 OR10P1Q8NGE3 313 aa9.97□□□□□ -0.81
VPS52-220ENST00000493674 RNASEH2CQ8TDP1 164 aaKnown RBP9.97□□□□□ -0.81
VPS52-220ENST00000493674 ST8SIA2Q92186 375 aa9.97□□□□□ -0.81
VPS52-220ENST00000493674 PINX1Q96BK5 328 aaKnown RBP9.97□□□□□ -0.81
VPS52-220ENST00000493674 FAM103A1Q9BTL3 118 aaKnown RBP9.97□□□□□ -0.81
VPS52-220ENST00000493674 ZNF471Q9BX82 626 aaPredicted RBP9.97□□□□□ -0.81
VPS52-220ENST00000493674 CDC42EP3Q9UKI2 254 aa9.97□□□□□ -0.81
VPS52-220ENST00000493674 BTBD17A6NE02 478 aa9.96□□□□□ -0.82
VPS52-220ENST00000493674 SH2D7A6NKC9 451 aaPredicted RBP9.96□□□□□ -0.82
VPS52-220ENST00000493674 INAFM1C9JVW0 142 aa9.96□□□□□ -0.82
VPS52-220ENST00000493674 ATP6V0E1O15342 81 aa9.96□□□□□ -0.82
VPS52-220ENST00000493674 FBXO24O75426 580 aa9.96□□□□□ -0.82
VPS52-220ENST00000493674 JTBO76095 146 aa9.96□□□□□ -0.82
VPS52-220ENST00000493674 IGF1P05019 195 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms