RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 LRRC75AQ8NAA5 344 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 OR1L8Q8NGR8 309 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 PBOV1Q9GZY1 135 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 CACNG5Q9UF02 275 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 VWC2LB2RUY7 222 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 SRSF10O75494 262 aaKnown RBP5.73□□□□□ -1.49
VPS13B-205ENST00000493587 RPL31P62899 125 aaKnown RBP5.73□□□□□ -1.49
VPS13B-205ENST00000493587 ARL16Q0P5N6 197 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 C8orf46Q8TAG6 207 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 TM4SF19Q96DZ7 209 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 RAB9BQ9NP90 201 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 DNAJB12Q9NXW2 375 aaKnown RBP5.73□□□□□ -1.49
VPS13B-205ENST00000493587 ANAPC10Q9UM13 185 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 WDFY4Q6ZS81 3184 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 TRBV20OR9-2A0A075B6H5 130 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 TMSB15BA0A087X1C1 80 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 FNDC10F2Z333 226 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 TNFRSF6BO95407 300 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 IGLV3-19P01714 112 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 NTF4P34130 210 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 TNFRSF4P43489 277 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 PPP1CAP62136 330 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 CX3CL1P78423 397 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 SRSF1Q07955 248 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS13B-205ENST00000493587 FOXE3Q13461 319 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 CST6Q15828 149 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 MBNL2Q5VZF2 373 aaKnown RBP5.72□□□□□ -1.49
VPS13B-205ENST00000493587 C2orf91Q6ZV80 131 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 H1FNTQ75WM6 255 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-205ENST00000493587 OR2A1Q8NGT9 310 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 ABHD14BQ96IU4 210 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 KIR2DL4Q99706 377 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 SSBP3Q9BWW4 388 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-205ENST00000493587 TM2D2Q9BX73 214 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 RP1P56715 2156 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 KIR2DS3K7RE56 304 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 PPYP01298 95 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 EVI2AP22794 236 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 KIR2DS3Q14952 304 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 ODF3L1Q8IXM7 274 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 BCL6BQ8N143 479 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-205ENST00000493587 OR8A1Q8NGG7 326 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 OR2W1Q9Y3N9 320 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 PRSS37A4D1T9 235 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 DXOO77932 396 aaKnown RBP5.72□□□□□ -1.49
VPS13B-205ENST00000493587 IFITM1P13164 125 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 TFF2Q03403 129 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 FOXI1Q12951 378 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 KISS1Q15726 138 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 DEFB134Q4QY38 66 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 Q6AWC8 147 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 C1QL2Q7Z5L3 287 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 OR4X2Q8NGF9 303 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 TMEM54Q969K7 222 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 TRIB1Q96RU8 372 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 HSD17B10Q99714 261 aaKnown RBP5.72□□□□□ -1.49
VPS13B-205ENST00000493587 FAM173AQ9BQD7 235 aa5.72□□□□□ -1.49
VPS13B-205ENST00000493587 REPIN1Q9BWE0 567 aaKnown RBP5.72□□□□□ -1.49
VPS13B-205ENST00000493587 NCOA6Q14686 2063 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-205ENST00000493587 F5H768 121 aa5.71□□□□□ -1.49
VPS13B-205ENST00000493587 FCN3O75636 299 aa5.71□□□□□ -1.49
VPS13B-205ENST00000493587 NDUFV3P56181 108 aaKnown RBP5.71□□□□□ -1.49
VPS13B-205ENST00000493587 PSG7Q13046 419 aa5.71□□□□□ -1.49
VPS13B-205ENST00000493587 PDLIM3Q53GG5 364 aaPredicted RBP5.71□□□□□ -1.49
VPS13B-205ENST00000493587 PQLC2Q6ZP29 291 aa5.71□□□□□ -1.49
VPS13B-205ENST00000493587 GAPTQ8N292 157 aa5.71□□□□□ -1.49
VPS13B-205ENST00000493587 SGK494Q96LW2 274 aa5.71□□□□□ -1.49
VPS13B-205ENST00000493587 ZFHX4Q86UP3 3567 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 A0A087WX48 190 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 FOXI3A8MTJ6 420 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-205ENST00000493587 H3BVH4 76 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 GABRG2P18507 467 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 ZNF146Q15072 292 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 IBA57Q5T440 356 aaKnown RBP5.71□□□□□ -1.5
VPS13B-205ENST00000493587 FHL5Q5TD97 284 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 SPACA3Q8IXA5 215 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 TDHQ8IZJ6 230 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 GCSAMQ8N6F7 178 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 PTRH2Q9Y3E5 179 aaKnown RBP5.71□□□□□ -1.5
VPS13B-205ENST00000493587 MPC1Q9Y5U8 109 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 A0A1W2PP55 124 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 K7EMI3 77 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 TNFSF14O43557 240 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 EML2O95834 649 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 FAM53BQ14153 422 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 TMEM92Q6UXU6 159 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 OR13C6PQ8NH95 151 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 RDH5Q92781 318 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 GPX7Q96SL4 187 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-205ENST00000493587 CDIP1Q9H305 208 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 HEYLQ9NQ87 328 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-205ENST00000493587 PILRAQ9UKJ1 303 aa5.71□□□□□ -1.5
VPS13B-205ENST00000493587 C2CD4DB7Z1M9 353 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 CLDN14O95500 239 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 CD27P26842 260 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 CLRN1P58418 232 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 RASL11AQ6T310 242 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 SFTA2Q6UW10 78 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 YAF2Q8IY57 180 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 FADS6Q8N9I5 356 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms