RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 C20orf24Q9BUV8 137 aa12.89□□□□□ -0.35
SGMS1-204ENST00000492601 GGTLC1Q9BX51 225 aa12.89□□□□□ -0.35
SGMS1-204ENST00000492601 SCPEP1Q9HB40 452 aa12.89□□□□□ -0.35
SGMS1-204ENST00000492601 TMEM14BQ9NUH8 114 aa12.89□□□□□ -0.35
SGMS1-204ENST00000492601 F8W735 103 aaPredicted RBP12.88□□□□□ -0.35
SGMS1-204ENST00000492601 K7EIM0 57 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 M0QYG6 137 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 ZNF207O43670 478 aaKnown RBP12.88□□□□□ -0.35
SGMS1-204ENST00000492601 ADMP35318 185 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 Q56UQ5 140 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 SPSB3Q6PJ21 355 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 CADM3Q8N126 398 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 OR5B3Q8NH48 314 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 SEC22AQ96IW7 307 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 CMTM3Q96MX0 182 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 TSC22D3Q99576 134 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 C5orf66Q9H5L9 145 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 DAZ1Q9NQZ3 744 aaKnown RBP12.88□□□□□ -0.35
SGMS1-204ENST00000492601 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 UBQLN2Q9UHD9 624 aa12.88□□□□□ -0.35
SGMS1-204ENST00000492601 EPPK1P58107 5090 aaKnown RBP12.87□□□□□ -0.35
SGMS1-204ENST00000492601 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
SGMS1-204ENST00000492601 NDUFA4O00483 81 aa12.87□□□□□ -0.35
SGMS1-204ENST00000492601 IGKV1-39P01597 117 aa12.87□□□□□ -0.35
SGMS1-204ENST00000492601 IGKV1D-39P04432 117 aa12.87□□□□□ -0.35
SGMS1-204ENST00000492601 H2BFWTQ7Z2G1 175 aa12.87□□□□□ -0.35
SGMS1-204ENST00000492601 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
SGMS1-204ENST00000492601 OR2C3Q8N628 320 aa12.87□□□□□ -0.35
SGMS1-204ENST00000492601 OR4A16Q8NH70 328 aa12.87□□□□□ -0.35
SGMS1-204ENST00000492601 IL17DQ8TAD2 202 aa12.87□□□□□ -0.35
SGMS1-204ENST00000492601 ALMS1Q8TCU4 4167 aa12.87□□□□□ -0.35
SGMS1-204ENST00000492601 FAM25AB3EWG3 89 aa12.86□□□□□ -0.35
SGMS1-204ENST00000492601 FAM25CB3EWG5 89 aa12.86□□□□□ -0.35
SGMS1-204ENST00000492601 FAM25GB3EWG6 89 aa12.86□□□□□ -0.35
SGMS1-204ENST00000492601 RORCP51449 518 aa12.86□□□□□ -0.35
SGMS1-204ENST00000492601 MRGPRFQ96AM1 343 aa12.86□□□□□ -0.35
SGMS1-204ENST00000492601 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
SGMS1-204ENST00000492601 SPAG8Q99932 426 aaPredicted RBP12.86□□□□□ -0.35
SGMS1-204ENST00000492601 OVOL2Q9BRP0 275 aa12.86□□□□□ -0.35
SGMS1-204ENST00000492601 NAA50Q9GZZ1 169 aaKnown RBP12.86□□□□□ -0.35
SGMS1-204ENST00000492601 FAM212BQ9NTI7 297 aaPredicted RBP12.86□□□□□ -0.35
SGMS1-204ENST00000492601 TSPAN4O14817 238 aa12.85□□□□□ -0.35
SGMS1-204ENST00000492601 PI3P19957 117 aa12.85□□□□□ -0.35
SGMS1-204ENST00000492601 UCP3P55916 312 aa12.85□□□□□ -0.35
SGMS1-204ENST00000492601 LAMTOR1Q6IAA8 161 aa12.85□□□□□ -0.35
SGMS1-204ENST00000492601 MZT2AQ6P582 158 aa12.85□□□□□ -0.35
SGMS1-204ENST00000492601 OR1P1Q8NH06 330 aa12.85□□□□□ -0.35
SGMS1-204ENST00000492601 ATP6V0BQ99437 205 aa12.85□□□□□ -0.35
SGMS1-204ENST00000492601 IGHV3-48P01763 117 aa12.84□□□□□ -0.35
SGMS1-204ENST00000492601 CTSGP08311 255 aa12.84□□□□□ -0.35
SGMS1-204ENST00000492601 PGAM2P15259 253 aa12.84□□□□□ -0.35
SGMS1-204ENST00000492601 IZUMO4Q1ZYL8 232 aa12.84□□□□□ -0.35
SGMS1-204ENST00000492601 SPINK9Q5DT21 86 aa12.84□□□□□ -0.35
SGMS1-204ENST00000492601 KLK11Q9UBX7 282 aa12.84□□□□□ -0.35
SGMS1-204ENST00000492601 PRCDQ00LT1 54 aa12.83□□□□□ -0.36
SGMS1-204ENST00000492601 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
SGMS1-204ENST00000492601 PINX1Q96BK5 328 aaKnown RBP12.83□□□□□ -0.36
SGMS1-204ENST00000492601 ZNF414Q96IQ9 312 aa12.83□□□□□ -0.36
SGMS1-204ENST00000492601 EXTL2Q9UBQ6 330 aa12.83□□□□□ -0.36
SGMS1-204ENST00000492601 IGHV3-49A0A0A0MS15 119 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 I3L2K1 104 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 K7EMT4 169 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 NUPL2O15504 423 aaKnown RBP12.82□□□□□ -0.36
SGMS1-204ENST00000492601 YIF1AO95070 293 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 MT-CO2P00403 227 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 CTSDP07339 412 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-204ENST00000492601 SMIM18P0DKX4 95 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 MFAP4P55083 255 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 PIGPP57054 158 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 HSPE1P61604 102 aaKnown RBP12.82□□□□□ -0.36
SGMS1-204ENST00000492601 CTF1Q16619 201 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 ODF3L2Q3SX64 289 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 RNASE10Q5GAN6 216 aaKnown RBP12.82□□□□□ -0.36
SGMS1-204ENST00000492601 AP3S1Q92572 193 aa12.82□□□□□ -0.36
SGMS1-204ENST00000492601 OR4C46A6NHA9 309 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 C15orf62A8K5M9 175 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 JTBO76095 146 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 GABARAPO95166 117 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 CD3DP04234 171 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 PPP5CP53041 499 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 APOC4P55056 127 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 RND3P61587 244 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 RELQ04864 619 aaPredicted RBP12.81□□□□□ -0.36
SGMS1-204ENST00000492601 DEFB135Q30KP9 77 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 GPR107Q5VW38 600 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 ZNF114Q8NC26 417 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 TP53RKQ96S44 253 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 RNF2Q99496 336 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 SMPXQ9UHP9 88 aa12.81□□□□□ -0.36
SGMS1-204ENST00000492601 IGHV7-4-1A0A0J9YVY3 117 aa12.8□□□□□ -0.36
SGMS1-204ENST00000492601 IGKV1-5P01602 117 aa12.8□□□□□ -0.36
SGMS1-204ENST00000492601 ZNF182P17025 639 aaPredicted RBP12.8□□□□□ -0.36
SGMS1-204ENST00000492601 RPL35AP18077 110 aaKnown RBP12.8□□□□□ -0.36
SGMS1-204ENST00000492601 AKR1C2P52895 323 aa12.8□□□□□ -0.36
SGMS1-204ENST00000492601 ERHP84090 104 aaKnown RBP12.8□□□□□ -0.36
SGMS1-204ENST00000492601 LHFPL1Q86WI0 220 aa12.8□□□□□ -0.36
SGMS1-204ENST00000492601 TMEM116Q8NCL8 245 aa12.8□□□□□ -0.36
SGMS1-204ENST00000492601 OR4D10Q8NGI6 311 aa12.8□□□□□ -0.36
SGMS1-204ENST00000492601 ZNF486Q96H40 463 aaPredicted RBP12.8□□□□□ -0.36
SGMS1-204ENST00000492601 ABHD1Q96SE0 405 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms