RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 TMEM229BQ8NBD8 167 aa11.29□□□□□ -0.6
TOM1-215ENST00000491987 MUC7Q8TAX7 377 aa11.29□□□□□ -0.6
TOM1-215ENST00000491987 ZNF486Q96H40 463 aaPredicted RBP11.29□□□□□ -0.6
TOM1-215ENST00000491987 SPATA25Q9BR10 227 aa11.29□□□□□ -0.6
TOM1-215ENST00000491987 PALMDQ9NP74 551 aa11.29□□□□□ -0.6
TOM1-215ENST00000491987 C21orf62Q9NYP8 219 aa11.29□□□□□ -0.6
TOM1-215ENST00000491987 GABARAPH6UMI1 98 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 K7EIM0 57 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 RAB3DO95716 219 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 TAS2R19P59542 299 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 IZUMO4Q1ZYL8 232 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 SCGB2B2Q4G0G5 96 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 UBAC2Q8NBM4 344 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 OR1L6Q8NGR2 347 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 SCARB1Q8WTV0 552 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 TP53RKQ96S44 253 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 ZNF436Q9C0F3 470 aaPredicted RBP11.28□□□□□ -0.6
TOM1-215ENST00000491987 UFC1Q9Y3C8 167 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 CEPT1Q9Y6K0 416 aa11.28□□□□□ -0.6
TOM1-215ENST00000491987 OR11H12B2RN74 326 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 F8W735 103 aaPredicted RBP11.27□□□□□ -0.61
TOM1-215ENST00000491987 SCAF4O95104 1147 aaKnown RBP11.27□□□□□ -0.61
TOM1-215ENST00000491987 CD74P04233 296 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 Q56UQ5 140 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 STEAP1BQ6NZ63 245 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 RAB2BQ8WUD1 216 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 TMEM190Q8WZ59 177 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 MARC2Q969Z3 335 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 BSCL2Q96G97 398 aaPredicted RBP11.27□□□□□ -0.61
TOM1-215ENST00000491987 CITED4Q96RK1 184 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 CHRDL1Q9BU40 450 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 SRD5A3Q9H8P0 318 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 COPZ2Q9P299 210 aa11.27□□□□□ -0.61
TOM1-215ENST00000491987 RYR3Q15413 4870 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 C3orf85A0A1B0GTC6 90 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 IGKV1-5P01602 117 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 C8orf88P0DMB2 117 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 AKR1C2P52895 323 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 ELLP55199 621 aaPredicted RBP11.26□□□□□ -0.61
TOM1-215ENST00000491987 HSPE1P61604 102 aaKnown RBP11.26□□□□□ -0.61
TOM1-215ENST00000491987 MRPS10P82664 201 aaKnown RBP11.26□□□□□ -0.61
TOM1-215ENST00000491987 PRCDQ00LT1 54 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 SPINK9Q5DT21 86 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 LINC00322Q6ZN03 302 aaPredicted RBP11.26□□□□□ -0.61
TOM1-215ENST00000491987 SLC16A13Q7RTY0 426 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 OR2C3Q8N628 320 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 CCDC71LQ8N9Z2 235 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 OR52B4Q8NGK2 314 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 OR13C8Q8NGS7 320 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 OR1P1Q8NH06 330 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 TERB2Q8NHR7 220 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 ZFAND1Q8TCF1 268 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 MARCH1Q8TCQ1 289 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 DYNC2LI1Q8TCX1 351 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 MISP3Q96FF7 219 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 RETNQ9HD89 108 aa11.26□□□□□ -0.61
TOM1-215ENST00000491987 CCDC59Q9P031 241 aaKnown RBP11.26□□□□□ -0.61
TOM1-215ENST00000491987 MRPL27Q9P0M9 148 aaKnown RBP11.26□□□□□ -0.61
TOM1-215ENST00000491987 DNAH7Q8WXX0 4024 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 IGHV3OR16-8A0A075B7F1 116 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 RBMY1BA6NDE4 496 aaKnown RBP11.25□□□□□ -0.61
TOM1-215ENST00000491987 RBMY1EA6NEQ0 496 aaKnown RBP11.25□□□□□ -0.61
TOM1-215ENST00000491987 RBMY1DP0C7P1 496 aaKnown RBP11.25□□□□□ -0.61
TOM1-215ENST00000491987 ADMP35318 185 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 TMBIM6P55061 237 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 IL18Q14116 193 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 TRIM16LQ309B1 348 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 SP6Q3SY56 376 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 SPSB3Q6PJ21 355 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 RBPMS2Q6ZRY4 209 aaKnown RBP11.25□□□□□ -0.61
TOM1-215ENST00000491987 SMIM4Q8WVI0 70 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 DIRAS2Q96HU8 199 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 C20orf24Q9BUV8 137 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 EDA2RQ9HAV5 297 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 NBEAL2Q6ZNJ1 2754 aa11.25□□□□□ -0.61
TOM1-215ENST00000491987 NDUFA4O00483 81 aa11.24□□□□□ -0.61
TOM1-215ENST00000491987 ZNF207O43670 478 aaKnown RBP11.24□□□□□ -0.61
TOM1-215ENST00000491987 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
TOM1-215ENST00000491987 P0C879 139 aa11.24□□□□□ -0.61
TOM1-215ENST00000491987 SSBP1Q04837 148 aaKnown RBP11.24□□□□□ -0.61
TOM1-215ENST00000491987 MEF2DQ14814 521 aa11.24□□□□□ -0.61
TOM1-215ENST00000491987 CASC10Q5T4H9 136 aa11.24□□□□□ -0.61
TOM1-215ENST00000491987 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
TOM1-215ENST00000491987 ISOC1Q96CN7 298 aa11.24□□□□□ -0.61
TOM1-215ENST00000491987 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
TOM1-215ENST00000491987 BCL7BQ9BQE9 202 aa11.24□□□□□ -0.61
TOM1-215ENST00000491987 C6orf62Q9GZU0 229 aaPredicted RBP11.24□□□□□ -0.61
TOM1-215ENST00000491987 DAZ1Q9NQZ3 744 aaKnown RBP11.24□□□□□ -0.61
TOM1-215ENST00000491987 TRAV25A0A0B4J276 109 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 A0A0B4J293 547 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 DISC1C4P0D8 188 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 I3L2K1 104 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 NOL3O60936 208 aaKnown RBP11.23□□□□□ -0.61
TOM1-215ENST00000491987 ATG12O94817 140 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 MT-CO2P00403 227 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 IGHV3-48P01763 117 aa11.23□□□□□ -0.61
TOM1-215ENST00000491987 LYL1P12980 280 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms