RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 BATF2Q8N1L9 274 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 PRR18Q8N4B5 295 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 ZNF808Q8N4W9 903 aaPredicted RBP4.77□□□□□ -1.65
VPS41-214ENST00000490924 OR5AU1Q8NGC0 362 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 OSR1Q8TAX0 266 aaPredicted RBP4.77□□□□□ -1.65
VPS41-214ENST00000490924 MRGPRDQ8TDS7 321 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 ZNF714Q96N38 554 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 MS4A5Q9H3V2 200 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 ENY2Q9NPA8 101 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 ZNF586Q9NXT0 402 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 C1RLQ9NZP8 487 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 FOXJ2Q9P0K8 574 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 SPRR3Q9UBC9 169 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 CDC42EP3Q9UKI2 254 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 PSG11Q9UQ72 335 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 USF3Q68DE3 2245 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 PCSK5Q92824 1860 aa4.77□□□□□ -1.65
VPS41-214ENST00000490924 FRYLO94915 3013 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 NCKAP5O14513 1909 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 IGKV1D-17A0A075B6S4 117 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 TRAV38-1A0A0B4J264 116 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 A0A1B0GV90 55 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 SMIM27A0A1W2PRY6 76 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 LNP1A1A4G5 178 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 FAM231BA6NCW3 169 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 MBD3L4A6NDZ8 208 aaPredicted RBP4.76□□□□□ -1.65
VPS41-214ENST00000490924 MBD3L3A6NE82 208 aaPredicted RBP4.76□□□□□ -1.65
VPS41-214ENST00000490924 MBD3L5A6NJ08 208 aaPredicted RBP4.76□□□□□ -1.65
VPS41-214ENST00000490924 ZNF705GA8MUZ8 300 aaPredicted RBP4.76□□□□□ -1.65
VPS41-214ENST00000490924 M0R1X1 148 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 FCGR3BO75015 233 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 GRPP07492 148 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 OR4A8P0C604 315 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 CECR9P0C854 216 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 SSTR5P35346 364 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 GLRXP35754 106 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 CHRNA7P36544 502 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 NBL1P41271 181 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 ATP5G3P48201 142 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 GNG4P50150 75 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 PPOXP50336 477 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 TDGF1P3P51864 188 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 EDDM3BP56851 147 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 MEF2CQ06413 473 aaPredicted RBP4.76□□□□□ -1.65
VPS41-214ENST00000490924 USF2Q15853 346 aaPredicted RBP4.76□□□□□ -1.65
VPS41-214ENST00000490924 TIMM23BQ5SRD1 257 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 PVRIGQ6DKI7 326 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 Q6ZR03 302 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 MMD2Q8IY49 270 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 CD177Q8N6Q3 437 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 KLHDC1Q8N7A1 406 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 NECAP1Q8NC96 275 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 ZNF439Q8NDP4 499 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 MBD3L2Q8NHZ7 208 aaPredicted RBP4.76□□□□□ -1.65
VPS41-214ENST00000490924 IL17DQ8TAD2 202 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 OCC1Q8TAD7 63 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 VSTM2AQ8TAG5 236 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 ZNF596Q8TC21 504 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 LRRC29Q8WV35 223 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 C1orf159Q96HA4 380 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 SNHG12Q9BXW3 62 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 HES7Q9BYE0 225 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 PRO1933Q9H354 126 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 FSCN3Q9NQT6 498 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 CALYQ9NYX4 217 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 PLA2G3Q9NZ20 509 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 TBL2Q9Y4P3 447 aaKnown RBP4.76□□□□□ -1.65
VPS41-214ENST00000490924 V9GYV3 84 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 AHCTF1Q8WYP5 2266 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 ZNF407Q9C0G0 2248 aa4.76□□□□□ -1.65
VPS41-214ENST00000490924 ATRXP46100 2492 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 TRAV39A0A0B4J263 110 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 A0A1W2PN81 502 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 HELTA6NFD8 242 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 UPK2O00526 184 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 FCN1O00602 326 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 RRHO14718 337 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 OR2J3O76001 311 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 SCGB1D1O95968 90 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 CGAP01215 116 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 AMY1AP04745 511 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 GPX1P07203 203 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 LINC00869P0C866 280 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 RD3LP0DJH9 198 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 C8orf88P0DMB2 117 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 CD59P13987 128 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 CA7P43166 264 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 COMPP49747 757 aaPredicted RBP4.75□□□□□ -1.65
VPS41-214ENST00000490924 KLF5Q13887 457 aaPredicted RBP4.75□□□□□ -1.65
VPS41-214ENST00000490924 PMCHL1Q16048 86 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 ALKBH6Q3KRA9 238 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 TEX36Q5VZQ5 186 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 MIC13Q5XKP0 118 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 OR4A47Q6IF82 309 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 VWA1Q6PCB0 445 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 LINC00696Q6ZRV3 163 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 Q6ZSN1 163 aa4.75□□□□□ -1.65
VPS41-214ENST00000490924 SLC25A48Q6ZT89 311 aaKnown RBP4.75□□□□□ -1.65
VPS41-214ENST00000490924 MYPOPQ86VE0 399 aaPredicted RBP4.75□□□□□ -1.65
VPS41-214ENST00000490924 TGIF2LXQ8IUE1 241 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms