RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
SRGAP3-209ENST00000490889 FCGR2BP31994 310 aaPredicted RBP12.26□□□□□ -0.45
SRGAP3-209ENST00000490889 NEDD8Q15843 81 aa12.26□□□□□ -0.45
SRGAP3-209ENST00000490889 LAMTOR1Q6IAA8 161 aa12.26□□□□□ -0.45
SRGAP3-209ENST00000490889 APRG1Q8IVJ8 170 aa12.26□□□□□ -0.45
SRGAP3-209ENST00000490889 KIR2DL5AQ8N109 375 aa12.26□□□□□ -0.45
SRGAP3-209ENST00000490889 OR5B3Q8NH48 314 aa12.26□□□□□ -0.45
SRGAP3-209ENST00000490889 KIR2DL5BQ8NHK3 375 aa12.26□□□□□ -0.45
SRGAP3-209ENST00000490889 DGCR14Q96DF8 476 aaKnown RBP12.26□□□□□ -0.45
SRGAP3-209ENST00000490889 ATP6V0BQ99437 205 aa12.26□□□□□ -0.45
SRGAP3-209ENST00000490889 OR4C46A6NHA9 309 aa12.25□□□□□ -0.45
SRGAP3-209ENST00000490889 CTSGP08311 255 aa12.25□□□□□ -0.45
SRGAP3-209ENST00000490889 Q56UQ5 140 aa12.25□□□□□ -0.45
SRGAP3-209ENST00000490889 STPG3Q8N7X2 389 aa12.25□□□□□ -0.45
SRGAP3-209ENST00000490889 BORCS5Q969J3 196 aa12.25□□□□□ -0.45
SRGAP3-209ENST00000490889 RNF2Q99496 336 aa12.25□□□□□ -0.45
SRGAP3-209ENST00000490889 MAP6D1Q9H9H5 199 aa12.25□□□□□ -0.45
SRGAP3-209ENST00000490889 SMPXQ9UHP9 88 aa12.25□□□□□ -0.45
SRGAP3-209ENST00000490889 IGHV3-49A0A0A0MS15 119 aa12.24□□□□□ -0.45
SRGAP3-209ENST00000490889 C15orf62A8K5M9 175 aa12.24□□□□□ -0.45
SRGAP3-209ENST00000490889 NAT1P18440 290 aa12.24□□□□□ -0.45
SRGAP3-209ENST00000490889 ATF4P18848 351 aaPredicted RBP12.24□□□□□ -0.45
SRGAP3-209ENST00000490889 TAS2R20P59543 309 aa12.24□□□□□ -0.45
SRGAP3-209ENST00000490889 CADM3Q8N126 398 aa12.24□□□□□ -0.45
SRGAP3-209ENST00000490889 RPP25LQ8N5L8 163 aaKnown RBP12.24□□□□□ -0.45
SRGAP3-209ENST00000490889 GALNT14Q96FL9 552 aa12.24□□□□□ -0.45
SRGAP3-209ENST00000490889 TMEM14BQ9NUH8 114 aa12.24□□□□□ -0.45
SRGAP3-209ENST00000490889 C15orf61A6NNL5 157 aa12.23□□□□□ -0.45
SRGAP3-209ENST00000490889 SNAPC5O75971 98 aa12.23□□□□□ -0.45
SRGAP3-209ENST00000490889 UBE2NLQ5JXB2 153 aa12.23□□□□□ -0.45
SRGAP3-209ENST00000490889 OR5H2Q8NGV7 314 aa12.23□□□□□ -0.45
SRGAP3-209ENST00000490889 S100A16Q96FQ6 103 aaKnown RBP12.23□□□□□ -0.45
SRGAP3-209ENST00000490889 RHPN1-AS1Q9BWJ2 59 aa12.23□□□□□ -0.45
SRGAP3-209ENST00000490889 Q9H521 79 aa12.23□□□□□ -0.45
SRGAP3-209ENST00000490889 PRNDQ9UKY0 176 aa12.23□□□□□ -0.45
SRGAP3-209ENST00000490889 HERC2O95714 4834 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 IGHV7-4-1A0A0J9YVY3 117 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 I3L2K1 104 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 GPR31O00270 319 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 CHEK1O14757 476 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 TMEM127O75204 238 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 IGHV3-48P01763 117 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 RPS19P39019 145 aaKnown RBP12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 TFPI2P48307 235 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 PHLDA2Q53GA4 152 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 TMEM69Q5SWH9 247 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 LYSMD2Q8IV50 215 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 SAMD12Q8N8I0 201 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 OR1P1Q8NH06 330 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 TMEM56Q96MV1 263 aa12.22□□□□□ -0.45
SRGAP3-209ENST00000490889 IGKV3-7A0A075B6H7 116 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 DEDDO75618 318 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 IGKV1-39P01597 117 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 IGKV1D-39P04432 117 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 HLA-DMAP28067 261 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 HRH1P35367 487 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 TAS2R46P59540 309 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 FAM90A2PQ658T7 463 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 CMTM1Q8IZ96 169 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 TMEM116Q8NCL8 245 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 TSPAN14Q8NG11 270 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 OR6F1Q8NGZ6 308 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 PHLDA1Q8WV24 401 aaPredicted RBP12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 SLC25A46Q96AG3 418 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 OR10C1Q96KK4 312 aa12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 KLK5Q9Y337 293 aaPredicted RBP12.21□□□□□ -0.45
SRGAP3-209ENST00000490889 IGHV3OR16-13A0A075B7E8 117 aa12.2□□□□□ -0.46
SRGAP3-209ENST00000490889 IGHV3-74A0A0B4J1X5 117 aa12.2□□□□□ -0.46
SRGAP3-209ENST00000490889 MISP3Q96FF7 219 aa12.2□□□□□ -0.46
SRGAP3-209ENST00000490889 SEC22AQ96IW7 307 aa12.2□□□□□ -0.46
SRGAP3-209ENST00000490889 NXF2Q9GZY0 626 aaKnown RBP12.2□□□□□ -0.46
SRGAP3-209ENST00000490889 CSTL1Q9H114 145 aa12.2□□□□□ -0.46
SRGAP3-209ENST00000490889 NUPL2O15504 423 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 YIF1AO95070 293 aa12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 MT-CO2P00403 227 aa12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 PRSS3P35030 304 aa12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 LSM3P62310 102 aaKnown RBP12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 RELQ04864 619 aaPredicted RBP12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 TBC1D26Q86UD7 250 aa12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 CROCCP3Q8IVE0 287 aa12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 GBGT1Q8N5D6 347 aa12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 TMEM217Q8N7C4 229 aa12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 TSC22D3Q99576 134 aa12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 KRTAP17-1Q9BYP8 105 aa12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 FKBP11Q9NYL4 201 aa12.19□□□□□ -0.46
SRGAP3-209ENST00000490889 MPTX1A8MV57 137 aa12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 APOHP02749 345 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 EIF4EP06730 217 aaKnown RBP12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 MFAP4P55083 255 aa12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 PRCDQ00LT1 54 aa12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 KCTD21Q4G0X4 260 aa12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 LILRB2Q8N423 598 aa12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 ZNF114Q8NC26 417 aa12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 GPX8Q8TED1 209 aa12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 MRGPRFQ96AM1 343 aa12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 YIPF6Q96EC8 236 aa12.18□□□□□ -0.46
SRGAP3-209ENST00000490889 TRAV14DV4A0A0A6YYC5 116 aa12.17□□□□□ -0.46
SRGAP3-209ENST00000490889 NANOS2P60321 138 aaKnown RBP12.17□□□□□ -0.46
SRGAP3-209ENST00000490889 IZUMO4Q1ZYL8 232 aa12.17□□□□□ -0.46
SRGAP3-209ENST00000490889 ST8SIA2Q92186 375 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms