RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	RRH	O14718	337 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	CA2	P00918	260 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	GCG	P01275	180 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	LIPF	P07098	398 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	OR10J4	P0C629	311 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	C8orf88	P0DMB2	117 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	GCHFR	P30047	84 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	FGF8	P55075	233 aa	Predicted RBP	5.18	□□□□□ -1.58
FN1-223	ENST00000490833	ERVFRD-1	P60508	538 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	CD69	Q07108	199 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	SRSF6	Q13247	344 aa	Known RBP	5.18	□□□□□ -1.58
FN1-223	ENST00000490833	TMEM155	Q4W5P6	130 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	CCDC144NL	Q6NUI1	221 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	C5orf24	Q7Z6I8	188 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	ABHD12	Q8N2K0	398 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	STPG3	Q8N7X2	389 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	DEFB108B	Q8NET1	73 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	C8orf46	Q8TAG6	207 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	C2CD4C	Q8TF44	421 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.18	□□□□□ -1.58
FN1-223	ENST00000490833	TMEM18	Q96B42	140 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	SNRNP40	Q96DI7	357 aa	Known RBP	5.18	□□□□□ -1.58
FN1-223	ENST00000490833	C5orf30	Q96GV9	206 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	SFRP2	Q96HF1	295 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	PACRG	Q96M98	296 aa	Predicted RBP	5.18	□□□□□ -1.58
FN1-223	ENST00000490833	TMEM133	Q9H2Q1	129 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	C7orf69	Q9H7B7	122 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	VSIR	Q9H7M9	311 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	INSIG2	Q9Y5U4	225 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	GTF3C1	Q12789	2109 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	PTPRB	P23467	1997 aa		5.18	□□□□□ -1.58
FN1-223	ENST00000490833	ESPL1	Q14674	2120 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	PIEZO1	Q92508	2521 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	TRAV30	A0A087WSZ9	112 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	FBLL1	A6NHQ2	334 aa	Known RBP	5.17	□□□□□ -1.58
FN1-223	ENST00000490833	C22orf46	C9J442	243 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	DVL1	O14640	695 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	ZNHIT1	O43257	154 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	EIF3G	O75821	320 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
FN1-223	ENST00000490833	IGKV1D-33	P01593	117 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	IGKV1-33	P01594	117 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	IGHV2-70	P01814	119 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	OR5G3	P0C626	314 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	IGHV1-8	P0DP01	117 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	AKR1C3	P42330	323 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	CA7	P43166	264 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	GNG4	P50150	75 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	NDUFA6	P56556	154 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	PAFAH1B2	P68402	229 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	TFF3	Q07654	80 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	LBH	Q53QV2	105 aa	Predicted RBP	5.17	□□□□□ -1.58
FN1-223	ENST00000490833	FAM78B	Q5VT40	261 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	KRTAP5-3	Q6L8H2	238 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	LINC01551	Q86U37	167 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	TMEM183A	Q8IXX5	376 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	ZFP82	Q8N141	532 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	ARL6IP6	Q8N6S5	226 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	OR8B3	Q8NGG8	313 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	OR10G8	Q8NGN5	311 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	OR1P1	Q8NH06	330 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	TMEM170A	Q8WVE7	144 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	H1FX	Q92522	213 aa	Known RBP	5.17	□□□□□ -1.58
FN1-223	ENST00000490833	ST6GALNAC6	Q969X2	333 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	WFIKKN1	Q96NZ8	548 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	OR8B2	Q96RD0	313 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	MGST2	Q99735	147 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	NABP2	Q9BQ15	211 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	DCTN5	Q9BTE1	182 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	HINT2	Q9BX68	163 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	CLEC7A	Q9BXN2	247 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	ZNF430	Q9H8G1	570 aa	Predicted RBP	5.17	□□□□□ -1.58
FN1-223	ENST00000490833	DMRT1	Q9Y5R6	373 aa		5.17	□□□□□ -1.58
FN1-223	ENST00000490833	INTS1	Q8N201	2190 aa	Known RBP	5.16	□□□□□ -1.58
FN1-223	ENST00000490833	MUC6	Q6W4X9	2439 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	TCRBV4S1A1T	A0A5B7	111 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	MED19	A0JLT2	244 aa	Predicted RBP	5.16	□□□□□ -1.58
FN1-223	ENST00000490833	SHISA9	B4DS77	424 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	TSTD3	H0UI37	97 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833		M0R1W7	72 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	ISLR	O14498	428 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	COX7A2P2	O60397	106 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	HIST1H2BK	O60814	126 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	NDUFB4	O95168	129 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	TRGC2	P03986	189 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	HIST1H2BJ	P06899	126 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	THBD	P07204	575 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	SAA1	P0DJI8	122 aa	Predicted RBP	5.16	□□□□□ -1.58
FN1-223	ENST00000490833	ARL14EPL	P0DKL9	152 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	HIST1H2BO	P23527	126 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	HIST1H2BB	P33778	126 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	PDLIM4	P50479	330 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	CNN1	P51911	297 aa	Known RBP	5.16	□□□□□ -1.58
FN1-223	ENST00000490833	HIST1H2BD	P58876	126 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	YPEL3	P61236	119 aa	Predicted RBP	5.16	□□□□□ -1.58
FN1-223	ENST00000490833	HIST1H2BC	P62807	126 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	RAN	P62826	216 aa	Known RBP	5.16	□□□□□ -1.58
FN1-223	ENST00000490833	GAMT	Q14353	236 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	HIST2H2BE	Q16778	126 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	MSMP	Q1L6U9	139 aa		5.16	□□□□□ -1.58
FN1-223	ENST00000490833	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.16	□□□□□ -1.58

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