RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 FAM209BQ5JX69 171 aa13.52□□□□□ -0.25
ERCC3-207ENST00000490062 PVRIGQ6DKI7 326 aa13.52□□□□□ -0.25
ERCC3-207ENST00000490062 ETV3LQ6ZN32 361 aa13.52□□□□□ -0.25
ERCC3-207ENST00000490062 C18orf65Q6ZTR6 163 aa13.52□□□□□ -0.25
ERCC3-207ENST00000490062 MS4A10Q96PG2 267 aa13.52□□□□□ -0.25
ERCC3-207ENST00000490062 P2RX4Q99571 388 aa13.52□□□□□ -0.25
ERCC3-207ENST00000490062 PDCD10Q9BUL8 212 aa13.52□□□□□ -0.25
ERCC3-207ENST00000490062 GNB4Q9HAV0 340 aa13.52□□□□□ -0.25
ERCC3-207ENST00000490062 F11RQ9Y624 299 aaKnown RBP13.52□□□□□ -0.25
ERCC3-207ENST00000490062 CYB5BO43169 146 aa13.51□□□□□ -0.25
ERCC3-207ENST00000490062 ZNF343Q6P1L6 599 aa13.51□□□□□ -0.25
ERCC3-207ENST00000490062 PLET1Q6UQ28 207 aa13.51□□□□□ -0.25
ERCC3-207ENST00000490062 C8orf86Q6ZUL3 223 aa13.51□□□□□ -0.25
ERCC3-207ENST00000490062 OR1P1Q8NH06 330 aa13.51□□□□□ -0.25
ERCC3-207ENST00000490062 ZNF431Q8TF32 576 aaPredicted RBP13.51□□□□□ -0.25
ERCC3-207ENST00000490062 PLEKHA3Q9HB20 300 aa13.51□□□□□ -0.25
ERCC3-207ENST00000490062 ZNF355PQ9NSJ1 428 aa13.51□□□□□ -0.25
ERCC3-207ENST00000490062 HSPB7Q9UBY9 170 aa13.51□□□□□ -0.25
ERCC3-207ENST00000490062 VWFP04275 2813 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 A0A1W2PRX2 142 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 FAM90A26D6RGX4 464 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 PRAF2O60831 178 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 PTTG1O95997 202 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 IFNA17P01571 189 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 RHOGP84095 191 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 BSXQ3C1V8 233 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 WFDC9Q8NEX5 89 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 HINT2Q9BX68 163 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 THYN1Q9P016 225 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 DMRT1Q9Y5R6 373 aa13.5□□□□□ -0.25
ERCC3-207ENST00000490062 NUDT19A8MXV4 375 aa13.49□□□□□ -0.25
ERCC3-207ENST00000490062 ERHP84090 104 aaKnown RBP13.49□□□□□ -0.25
ERCC3-207ENST00000490062 TNFRSF9Q07011 255 aa13.49□□□□□ -0.25
ERCC3-207ENST00000490062 GGNBP1Q5YKI7 109 aa13.49□□□□□ -0.25
ERCC3-207ENST00000490062 RAX2Q96IS3 184 aa13.49□□□□□ -0.25
ERCC3-207ENST00000490062 ATP6V0BQ99437 205 aa13.49□□□□□ -0.25
ERCC3-207ENST00000490062 C13orf42A0A1B0GVH6 325 aa13.48□□□□□ -0.25
ERCC3-207ENST00000490062 CCL24O00175 119 aa13.48□□□□□ -0.25
ERCC3-207ENST00000490062 PRH1P02810 166 aa13.48□□□□□ -0.25
ERCC3-207ENST00000490062 REG1AP05451 166 aa13.48□□□□□ -0.25
ERCC3-207ENST00000490062 DEFA4P12838 97 aa13.48□□□□□ -0.25
ERCC3-207ENST00000490062 MFAP2P55001 183 aa13.48□□□□□ -0.25
ERCC3-207ENST00000490062 TREML4Q6UXN2 200 aa13.48□□□□□ -0.25
ERCC3-207ENST00000490062 C19orf35Q6ZS72 473 aa13.48□□□□□ -0.25
ERCC3-207ENST00000490062 OR52B4Q8NGK2 314 aa13.48□□□□□ -0.25
ERCC3-207ENST00000490062 FBXL7Q9UJT9 491 aa13.48□□□□□ -0.25
ERCC3-207ENST00000490062 SNRPGP15A8MWD9 76 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 INMT-MINDY4F8WBC2 141 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 OR2J3O76001 311 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 IFNA21P01568 189 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 HOXB5P09067 269 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 ATP5G2Q06055 141 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 DCTN2Q13561 401 aaKnown RBP13.47□□□□□ -0.25
ERCC3-207ENST00000490062 C15orf32Q32M92 178 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 LINC00482Q8N8I6 264 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 VN1R17PQ8TDU5 208 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 CXorf58Q96LI9 332 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 SEC22CQ9BRL7 303 aa13.47□□□□□ -0.25
ERCC3-207ENST00000490062 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.46□□□□□ -0.25
ERCC3-207ENST00000490062 ADAP1O75689 374 aa13.46□□□□□ -0.25
ERCC3-207ENST00000490062 NDUFB8O95169 186 aa13.46□□□□□ -0.25
ERCC3-207ENST00000490062 HSPB1P04792 205 aaKnown RBP13.46□□□□□ -0.25
ERCC3-207ENST00000490062 RNASE2P10153 161 aaKnown RBP13.46□□□□□ -0.25
ERCC3-207ENST00000490062 ZNF616Q08AN1 781 aa13.46□□□□□ -0.25
ERCC3-207ENST00000490062 C12orf45Q8N5I9 185 aaPredicted RBP13.46□□□□□ -0.25
ERCC3-207ENST00000490062 OR11H1Q8NG94 326 aa13.46□□□□□ -0.25
ERCC3-207ENST00000490062 OR1N2Q8NGR9 330 aa13.46□□□□□ -0.25
ERCC3-207ENST00000490062 GPN1Q9HCN4 374 aaPredicted RBP13.46□□□□□ -0.25
ERCC3-207ENST00000490062 RANGRFQ9HD47 186 aaPredicted RBP13.46□□□□□ -0.25
ERCC3-207ENST00000490062 ENY2Q9NPA8 101 aa13.46□□□□□ -0.25
ERCC3-207ENST00000490062 MGAM2Q2M2H8 2515 aa13.46□□□□□ -0.26
ERCC3-207ENST00000490062 CMYA5Q8N3K9 4069 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 TRBV7-1A0A0A6YYK4 115 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 CORTO00230 105 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 LY86O95711 162 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 IGHV3-11P01762 117 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 PF4P02776 101 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 OR8U8P0C7N1 319 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 FCGR2BP31994 310 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-207ENST00000490062 HTR2BP41595 481 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 HOXA1P49639 335 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-207ENST00000490062 ATP5IP56385 69 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-207ENST00000490062 ID3Q02535 119 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 EXOSC2Q13868 293 aaKnown RBP13.45□□□□□ -0.26
ERCC3-207ENST00000490062 OR4D5Q8NGN0 318 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 OR1S1Q8NH92 325 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 PKD1L1Q8TDX9 2849 aa13.45□□□□□ -0.26
ERCC3-207ENST00000490062 LINC01619G3V211 115 aa13.44□□□□□ -0.26
ERCC3-207ENST00000490062 K7EIM0 57 aa13.44□□□□□ -0.26
ERCC3-207ENST00000490062 MED6O75586 246 aa13.44□□□□□ -0.26
ERCC3-207ENST00000490062 SNCAP37840 140 aa13.44□□□□□ -0.26
ERCC3-207ENST00000490062 SUB1P53999 127 aaKnown RBP eCLIP13.44□□□□□ -0.26
ERCC3-207ENST00000490062 DEFB136Q30KP8 78 aa13.44□□□□□ -0.26
ERCC3-207ENST00000490062 C2orf83Q53S99 150 aa13.44□□□□□ -0.26
ERCC3-207ENST00000490062 SPINK9Q5DT21 86 aa13.44□□□□□ -0.26
ERCC3-207ENST00000490062 SLC25A24Q6NUK1 477 aa13.44□□□□□ -0.26
ERCC3-207ENST00000490062 ZNF502Q8TBZ5 544 aa13.44□□□□□ -0.26
ERCC3-207ENST00000490062 EEF1AKMT3Q96AZ1 226 aa13.44□□□□□ -0.26
ERCC3-207ENST00000490062 PEF1Q9UBV8 284 aaKnown RBP13.44□□□□□ -0.26
ERCC3-207ENST00000490062 C7orf66A4D0T2 115 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms