RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 RBPMSQ93062 196 aaKnown RBP13.3□□□□□ -0.28
MDC1-206ENST00000489540 F11RQ9Y624 299 aaKnown RBP13.3□□□□□ -0.28
MDC1-206ENST00000489540 BMPR1BO00238 502 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 GGCTO75223 188 aaKnown RBP13.29□□□□□ -0.28
MDC1-206ENST00000489540 AKR1C4P17516 323 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 SYNJ2BPP57105 145 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 BAK1Q16611 211 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 IZUMO4Q1ZYL8 232 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 SELENOHQ8IZQ5 122 aaKnown RBP13.29□□□□□ -0.28
MDC1-206ENST00000489540 OR9G4Q8NGQ1 327 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 VN1R17PQ8TDU5 208 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 TMEM230Q96A57 120 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 PDCD10Q9BUL8 212 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 DMRT1Q9Y5R6 373 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 TMEM56-RWDD3S4R434 201 aa13.29□□□□□ -0.28
MDC1-206ENST00000489540 ANXA3P12429 323 aa13.28□□□□□ -0.28
MDC1-206ENST00000489540 ERHP84090 104 aaKnown RBP13.28□□□□□ -0.28
MDC1-206ENST00000489540 TMEM268Q5VZI3 342 aa13.28□□□□□ -0.28
MDC1-206ENST00000489540 CLEC19AQ6UXS0 136 aa13.28□□□□□ -0.28
MDC1-206ENST00000489540 OR2C3Q8N628 320 aa13.28□□□□□ -0.28
MDC1-206ENST00000489540 OR1P1Q8NH06 330 aa13.28□□□□□ -0.28
MDC1-206ENST00000489540 IL22RA2Q969J5 263 aa13.28□□□□□ -0.28
MDC1-206ENST00000489540 PLEKHA3Q9HB20 300 aa13.28□□□□□ -0.28
MDC1-206ENST00000489540 PIGBOS1A0A0B4J2F0 54 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 NAP1L6A6NFF2 107 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 K7EIL1 84 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 IFNA17P01571 189 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 IGHV3-23P01764 117 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 CLEC3BP05452 202 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 TMEM187Q14656 261 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 LHFPL5Q8TAF8 219 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 CCDC140Q96MF4 163 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.27□□□□□ -0.29
MDC1-206ENST00000489540 PEMTQ9UBM1 199 aa13.27□□□□□ -0.29
MDC1-206ENST00000489540 MFSD2BA6NFX1 497 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 INS-IGF2F8WCM5 200 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 ST8SIA3O43173 380 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 ARL3P36405 182 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 SRPXP78539 464 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 DCTN2Q13561 401 aaKnown RBP13.26□□□□□ -0.29
MDC1-206ENST00000489540 TMEM128Q5BJH2 165 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 LINC00299Q6ZSB3 139 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 GPHB5Q86YW7 130 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 ZNF502Q8TBZ5 544 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 ATP6V0BQ99437 205 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 SDHCQ99643 169 aaPredicted RBP13.26□□□□□ -0.29
MDC1-206ENST00000489540 SIGLEC8Q9NYZ4 499 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 ZNF256Q9Y2P7 627 aaPredicted RBP13.26□□□□□ -0.29
MDC1-206ENST00000489540 S4R3C0 116 aa13.26□□□□□ -0.29
MDC1-206ENST00000489540 A0A0G2JRQ6 117 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 CENPXA8MT69 81 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 PPP5D1E7EU14 171 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 OR2C1O95371 312 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 MFAP2P55001 183 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 SUPT4H1P63272 117 aaKnown RBP13.25□□□□□ -0.29
MDC1-206ENST00000489540 AARDQ4LEZ3 155 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 DEFB121Q5J5C9 76 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 IL34Q6ZMJ4 242 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 Q6ZRM9 215 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 TMED4Q7Z7H5 227 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 SLC35G3Q8N808 338 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 ZNF114Q8NC26 417 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 OR52E5Q8NH55 327 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 CACFD1Q9UGQ2 172 aa13.25□□□□□ -0.29
MDC1-206ENST00000489540 SNCAP37840 140 aa13.24□□□□□ -0.29
MDC1-206ENST00000489540 SPCS3P61009 180 aa13.24□□□□□ -0.29
MDC1-206ENST00000489540 RBMS2Q15434 407 aaKnown RBP13.24□□□□□ -0.29
MDC1-206ENST00000489540 FAM106AQ4KMX7 169 aa13.24□□□□□ -0.29
MDC1-206ENST00000489540 LGI3Q8N145 548 aa13.24□□□□□ -0.29
MDC1-206ENST00000489540 GPR146Q96CH1 333 aa13.24□□□□□ -0.29
MDC1-206ENST00000489540 C7orf50Q9BRJ6 194 aaKnown RBP13.24□□□□□ -0.29
MDC1-206ENST00000489540 ENY2Q9NPA8 101 aa13.24□□□□□ -0.29
MDC1-206ENST00000489540 DNAH3Q8TD57 4116 aa13.24□□□□□ -0.29
MDC1-206ENST00000489540 A0A0B4J2A0 478 aa13.23□□□□□ -0.29
MDC1-206ENST00000489540 LGALS9O00182 355 aa13.23□□□□□ -0.29
MDC1-206ENST00000489540 HLA-AP01891 365 aaKnown RBP13.23□□□□□ -0.29
MDC1-206ENST00000489540 CSN3P07498 182 aa13.23□□□□□ -0.29
MDC1-206ENST00000489540 IL7P13232 177 aa13.23□□□□□ -0.29
MDC1-206ENST00000489540 SPINK9Q5DT21 86 aa13.23□□□□□ -0.29
MDC1-206ENST00000489540 SCARB1Q8WTV0 552 aa13.23□□□□□ -0.29
MDC1-206ENST00000489540 C21orf62Q9NYP8 219 aa13.23□□□□□ -0.29
MDC1-206ENST00000489540 CACNG5Q9UF02 275 aa13.23□□□□□ -0.29
MDC1-206ENST00000489540 SHPKQ9UHJ6 478 aa13.23□□□□□ -0.29
MDC1-206ENST00000489540 K7EIM0 57 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 LY86O95711 162 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 IGLV1-51P01701 117 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 GPR183P32249 361 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 HOXA1P49639 335 aaPredicted RBP13.22□□□□□ -0.29
MDC1-206ENST00000489540 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.29
MDC1-206ENST00000489540 CNPY1Q3B7I2 92 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 PLET1Q6UQ28 207 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 CENPSQ8N2Z9 138 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 GAR1Q9NY12 217 aaKnown RBP13.22□□□□□ -0.29
MDC1-206ENST00000489540 LINC00854A0A1B0GVQ3 168 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 NDUFB6O95139 128 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 SPNP16150 400 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 VAMP1P23763 118 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 CCR6P51684 374 aa13.22□□□□□ -0.29
MDC1-206ENST00000489540 MISP3Q96FF7 219 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms