RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 MFSD2BA6NFX1 497 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 CDS2O95674 445 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 HLA-AP01891 365 aaKnown RBP12.05□□□□□ -0.48
LMX1A-204ENST00000489443 P0C879 139 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 SPINK9Q5DT21 86 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 FAM209BQ5JX69 171 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 TRIQKQ629K1 86 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 SELENOHQ8IZQ5 122 aaKnown RBP12.05□□□□□ -0.48
LMX1A-204ENST00000489443 LHFPL5Q8TAF8 219 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 TMEM230Q96A57 120 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 CXorf58Q96LI9 332 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 CCDC140Q96MF4 163 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 PRR25Q96S07 402 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 THYN1Q9P016 225 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 KCNIP3Q9Y2W7 256 aa12.05□□□□□ -0.48
LMX1A-204ENST00000489443 F11RQ9Y624 299 aaKnown RBP12.05□□□□□ -0.48
LMX1A-204ENST00000489443 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 LY86O95711 162 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 IFNA17P01571 189 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 ARL3P36405 182 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 MFAP2P55001 183 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 PRCDQ00LT1 54 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 BAK1Q16611 211 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 TMEM268Q5VZI3 342 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 TMED4Q7Z7H5 227 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 OR9G4Q8NGQ1 327 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 RBPMSQ93062 196 aaKnown RBP12.04□□□□□ -0.48
LMX1A-204ENST00000489443 PRR13Q9NZ81 148 aa12.04□□□□□ -0.48
LMX1A-204ENST00000489443 TRBV7-1A0A0A6YYK4 115 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 IGHV3-21A0A0B4J1V1 117 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 LINC00854A0A1B0GVQ3 168 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 ST8SIA3O43173 380 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 GGCTO75223 188 aaKnown RBP12.03□□□□□ -0.48
LMX1A-204ENST00000489443 OR2C1O95371 312 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 CLEC3BP05452 202 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 HAPLN4Q86UW8 402 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 OR2C3Q8N628 320 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 SLC35G3Q8N808 338 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 DEDD2Q8WXF8 326 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 PDCD10Q9BUL8 212 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 PLEKHA3Q9HB20 300 aa12.03□□□□□ -0.48
LMX1A-204ENST00000489443 ZNF256Q9Y2P7 627 aaPredicted RBP12.03□□□□□ -0.48
LMX1A-204ENST00000489443 COL7A1Q02388 2944 aa12.02□□□□□ -0.48
LMX1A-204ENST00000489443 SUPT4H1P63272 117 aaKnown RBP12.02□□□□□ -0.49
LMX1A-204ENST00000489443 ERHP84090 104 aaKnown RBP12.02□□□□□ -0.49
LMX1A-204ENST00000489443 TMEM187Q14656 261 aa12.02□□□□□ -0.49
LMX1A-204ENST00000489443 Q6ZRM9 215 aa12.02□□□□□ -0.49
LMX1A-204ENST00000489443 FAM219AQ8IW50 185 aa12.02□□□□□ -0.49
LMX1A-204ENST00000489443 OR1L6Q8NGR2 347 aa12.02□□□□□ -0.49
LMX1A-204ENST00000489443 ZNF502Q8TBZ5 544 aa12.02□□□□□ -0.49
LMX1A-204ENST00000489443 VN1R17PQ8TDU5 208 aa12.02□□□□□ -0.49
LMX1A-204ENST00000489443 GALNT14Q96FL9 552 aa12.02□□□□□ -0.49
LMX1A-204ENST00000489443 SDHCQ99643 169 aaPredicted RBP12.02□□□□□ -0.49
LMX1A-204ENST00000489443 ZC4H2Q9NQZ6 224 aa12.02□□□□□ -0.49
LMX1A-204ENST00000489443 TMEM56-RWDD3S4R434 201 aa12.02□□□□□ -0.49
LMX1A-204ENST00000489443 ANXA3P12429 323 aa12.01□□□□□ -0.49
LMX1A-204ENST00000489443 SPNP16150 400 aa12.01□□□□□ -0.49
LMX1A-204ENST00000489443 GPR183P32249 361 aa12.01□□□□□ -0.49
LMX1A-204ENST00000489443 CCR6P51684 374 aa12.01□□□□□ -0.49
LMX1A-204ENST00000489443 IL34Q6ZMJ4 242 aa12.01□□□□□ -0.49
LMX1A-204ENST00000489443 OR1P1Q8NH06 330 aa12.01□□□□□ -0.49
LMX1A-204ENST00000489443 GPR146Q96CH1 333 aa12.01□□□□□ -0.49
LMX1A-204ENST00000489443 MISP3Q96FF7 219 aa12.01□□□□□ -0.49
LMX1A-204ENST00000489443 SLC25A21Q9BQT8 299 aaPredicted RBP12.01□□□□□ -0.49
LMX1A-204ENST00000489443 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.01□□□□□ -0.49
LMX1A-204ENST00000489443 PEMTQ9UBM1 199 aa12.01□□□□□ -0.49
LMX1A-204ENST00000489443 ZNF320A2RRD8 509 aa12□□□□□ -0.49
LMX1A-204ENST00000489443 CSN3P07498 182 aa12□□□□□ -0.49
LMX1A-204ENST00000489443 SNCAP37840 140 aa12□□□□□ -0.49
LMX1A-204ENST00000489443 HOXA1P49639 335 aaPredicted RBP12□□□□□ -0.49
LMX1A-204ENST00000489443 FAM106AQ4KMX7 169 aa12□□□□□ -0.49
LMX1A-204ENST00000489443 PLET1Q6UQ28 207 aa12□□□□□ -0.49
LMX1A-204ENST00000489443 SCARB1Q8WTV0 552 aa12□□□□□ -0.49
LMX1A-204ENST00000489443 IL22RA2Q969J5 263 aa12□□□□□ -0.49
LMX1A-204ENST00000489443 ENY2Q9NPA8 101 aa12□□□□□ -0.49
LMX1A-204ENST00000489443 CACNG5Q9UF02 275 aa12□□□□□ -0.49
LMX1A-204ENST00000489443 IGHV3-35A0A0C4DH35 117 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 NAP1L6A6NFF2 107 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 OR2T8A6NH00 312 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 A6NHS1 94 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 K7EIM0 57 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 IGLV1-51P01701 117 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 IL7P13232 177 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 VAMP1P23763 118 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 TMEM128Q5BJH2 165 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 LYZL2Q7Z4W2 148 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 GPHB5Q86YW7 130 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 LGI3Q8N145 548 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 UBAC2Q8NBM4 344 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 ZNF114Q8NC26 417 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 C21orf62Q9NYP8 219 aa11.99□□□□□ -0.49
LMX1A-204ENST00000489443 CENPXA8MT69 81 aa11.98□□□□□ -0.49
LMX1A-204ENST00000489443 TGOLN2O43493 480 aa11.98□□□□□ -0.49
LMX1A-204ENST00000489443 SULT1A3P0DMM9 295 aa11.98□□□□□ -0.49
LMX1A-204ENST00000489443 SULT1A4P0DMN0 295 aa11.98□□□□□ -0.49
LMX1A-204ENST00000489443 SPCS3P61009 180 aa11.98□□□□□ -0.49
LMX1A-204ENST00000489443 SRPXP78539 464 aa11.98□□□□□ -0.49
LMX1A-204ENST00000489443 RBMS2Q15434 407 aaKnown RBP11.98□□□□□ -0.49
LMX1A-204ENST00000489443 CNPY1Q3B7I2 92 aa11.98□□□□□ -0.49
LMX1A-204ENST00000489443 Q56UQ5 140 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms