RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 TIMM23BQ5SRD1 257 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 LRRC37AA6NMS7 1700 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 IGKV1D-8A0A087WSZ0 117 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 PGPEP1LA6NFU8 196 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 Q9H3A6 140 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 ZNF319Q9P2F9 582 aa14.79□□□□□ -0.04
NPHP4-209ENST00000489180 A0A1B0GUT8 65 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 FMC1Q96HJ9 113 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 HIGD1CA8MV81 97 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 NPFFO15130 113 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 SFTPCP11686 197 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 GPR183P32249 361 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 RAB9AP51151 201 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 ATP5IP56385 69 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-209ENST00000489180 KLRB1Q12918 225 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 PAQR4Q8N4S7 273 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-209ENST00000489180 TRBV6-7A0A0A0MS04 114 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 IZUMO1RA6ND01 250 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 CEACAM4O75871 244 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 BSPH1Q075Z2 132 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 MESP1Q9BRJ9 268 aa14.78□□□□□ -0.04
NPHP4-209ENST00000489180 APOBEC3AP31941 199 aaPredicted RBP14.77□□□□□ -0.04
NPHP4-209ENST00000489180 SUMO2P61956 95 aaKnown RBP14.77□□□□□ -0.04
NPHP4-209ENST00000489180 SNRPD3P62318 126 aaKnown RBP14.77□□□□□ -0.04
NPHP4-209ENST00000489180 SAA2-SAA4A0A096LPE2 208 aa14.77□□□□□ -0.04
NPHP4-209ENST00000489180 SAA2P0DJI9 122 aaPredicted RBP14.77□□□□□ -0.04
NPHP4-209ENST00000489180 TSPOP30536 169 aa14.77□□□□□ -0.04
NPHP4-209ENST00000489180 WBP1Q96G27 269 aa14.77□□□□□ -0.04
NPHP4-209ENST00000489180 TNS1Q9HBL0 1735 aaKnown RBP14.77□□□□□ -0.04
NPHP4-209ENST00000489180 VSIRQ9H7M9 311 aa14.77□□□□□ -0.05
NPHP4-209ENST00000489180 DEPPQ9NTK1 212 aa14.77□□□□□ -0.05
NPHP4-209ENST00000489180 SVILO95425 2214 aa14.77□□□□□ -0.05
NPHP4-209ENST00000489180 NDUFA3O95167 84 aa14.77□□□□□ -0.05
NPHP4-209ENST00000489180 CENPVQ7Z7K6 275 aaPredicted RBP14.77□□□□□ -0.05
NPHP4-209ENST00000489180 OR13C6PQ8NH95 151 aa14.77□□□□□ -0.05
NPHP4-209ENST00000489180 ELOVL5Q9NYP7 299 aa14.77□□□□□ -0.05
NPHP4-209ENST00000489180 SAA1P0DJI8 122 aaPredicted RBP14.76□□□□□ -0.05
NPHP4-209ENST00000489180 MRAP2Q96G30 205 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 SCGB3A1Q96QR1 104 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 DMRTA2Q96SC8 542 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 MTCL1Q9Y4B5 1905 aaKnown RBP14.76□□□□□ -0.05
NPHP4-209ENST00000489180 CCL3L1P16619 93 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 PLAURQ03405 335 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 CD69Q07108 199 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 ZNF324BQ6AW86 544 aaPredicted RBP14.76□□□□□ -0.05
NPHP4-209ENST00000489180 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.76□□□□□ -0.05
NPHP4-209ENST00000489180 NRN1Q9NPD7 142 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 UMODP07911 640 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 ASIPP42127 132 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 ASXL3Q9C0F0 2248 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 TNFSF10P50591 281 aa14.76□□□□□ -0.05
NPHP4-209ENST00000489180 F8VVB4 439 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 F8VWA3 439 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 TM4SF5O14894 197 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 CLEC19AQ6UXS0 136 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 C1QL4Q86Z23 238 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 TSPAN13O95857 204 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 CCL19Q99731 98 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 DPM3Q9P2X0 92 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 TYMSP04818 313 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 TTC9CQ8N5M4 171 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 TMEM170AQ8WVE7 144 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 FAM131CQ96AQ9 280 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 C21orf62Q9NYP8 219 aa14.75□□□□□ -0.05
NPHP4-209ENST00000489180 IQCF6A8MYZ5 107 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 TMEM262E9PQX1 116 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 RNASE4P34096 147 aaKnown RBP14.74□□□□□ -0.05
NPHP4-209ENST00000489180 PDLIM4P50479 330 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 IMMP1LQ96LU5 166 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 ALPK2Q86TB3 2170 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 PYYP10082 97 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST1H2BKO60814 126 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST1H2BJP06899 126 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST1H2BOP23527 126 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST1H2BBP33778 126 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST1H2BDP58876 126 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST1H2BCP62807 126 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST2H2BEQ16778 126 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.74□□□□□ -0.05
NPHP4-209ENST00000489180 LHFPL4Q7Z7J7 247 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 FLVCR1-AS1Q8TAF5 88 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST1H2BHQ93079 126 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST1H2BNQ99877 126 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 HIST1H2BMQ99879 126 aa14.74□□□□□ -0.05
NPHP4-209ENST00000489180 A0A1B0GWB2 263 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 PPP1R27Q86WC6 154 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 C9orf106Q8NAJ2 232 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 ARPC1AQ92747 370 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 PATJQ8NI35 1801 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 FER1L6-AS1Q8NA97 138 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 GAS1P54826 345 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 FAM71F2Q6NXP2 309 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 NIT1Q86X76 327 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 TUBA4BQ9H853 241 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 APOMO95445 188 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 NAPSAO96009 420 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 FGFBP3Q8TAT2 258 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 FGF16O43320 207 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 LEPP41159 167 aa14.73□□□□□ -0.05
NPHP4-209ENST00000489180 NRN1LQ496H8 165 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms