RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CDK2AP2O75956 126 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 HPRT1P00492 218 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 NQO2P16083 231 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 OR10A3P58181 314 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 FABP5Q01469 135 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 RELQ04864 619 aaPredicted RBP11.64□□□□□ -0.55
USP48-210ENST00000489108 HSD17B13Q7Z5P4 300 aaPredicted RBP11.64□□□□□ -0.55
USP48-210ENST00000489108 DMBX1Q8NFW5 382 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 SECTM1Q8WVN6 248 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 HINT2Q9BX68 163 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 ATG5Q9H1Y0 275 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 DCSTAMPQ9H295 470 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 CLEC5AQ9NY25 188 aa11.64□□□□□ -0.55
USP48-210ENST00000489108 HERC1Q15751 4861 aa11.63□□□□□ -0.55
USP48-210ENST00000489108 RBFOX2O43251 390 aaKnown RBP eCLIP11.63□□□□□ -0.55
USP48-210ENST00000489108 APOHP02749 345 aaPredicted RBP11.63□□□□□ -0.55
USP48-210ENST00000489108 HSMCR30P0CW71 290 aa11.63□□□□□ -0.55
USP48-210ENST00000489108 TRAM1Q15629 374 aa11.63□□□□□ -0.55
USP48-210ENST00000489108 SOHLH1Q5JUK2 328 aa11.63□□□□□ -0.55
USP48-210ENST00000489108 HACD4Q5VWC8 232 aa11.63□□□□□ -0.55
USP48-210ENST00000489108 THOC7Q6I9Y2 204 aaKnown RBP11.63□□□□□ -0.55
USP48-210ENST00000489108 TRPT1Q86TN4 253 aaKnown RBP11.63□□□□□ -0.55
USP48-210ENST00000489108 OR1L8Q8NGR8 309 aa11.63□□□□□ -0.55
USP48-210ENST00000489108 NUDCD2Q8WVJ2 157 aa11.63□□□□□ -0.55
USP48-210ENST00000489108 ST8SIA2Q92186 375 aa11.63□□□□□ -0.55
USP48-210ENST00000489108 NDUFA4L2Q9NRX3 87 aa11.63□□□□□ -0.55
USP48-210ENST00000489108 LRP1BQ9NZR2 4599 aa11.63□□□□□ -0.55
USP48-210ENST00000489108 IGHV3-66A0A0C4DH42 116 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 C16orf90A8MZG2 172 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 ST8SIA3O43173 380 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 IFNA21P01568 189 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 IFNA17P01571 189 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 C4BPBP20851 252 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 RPL11P62913 178 aaKnown RBP11.62□□□□□ -0.55
USP48-210ENST00000489108 ARL6IP1Q15041 203 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 TMEM41BQ5BJD5 291 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 MORN3Q6PF18 240 aaPredicted RBP11.62□□□□□ -0.55
USP48-210ENST00000489108 Q6ZRM9 215 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 ANXA10Q9UJ72 324 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 TBC1D24Q9ULP9 559 aa11.62□□□□□ -0.55
USP48-210ENST00000489108 IFITM5A6NNB3 132 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 CD74P04233 296 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 CD5P06127 495 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 FGF2P09038 288 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 SPP1P10451 314 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 PTHLHP12272 177 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 PSMA1P25786 263 aaKnown RBP11.61□□□□□ -0.55
USP48-210ENST00000489108 C1orf134Q5TEV5 83 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 UBE2DNLQ8IWF7 75 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 PACRGLQ8N7B6 248 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 CSNK1G2-AS1Q8NCQ2 148 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 DUSP18Q8NEJ0 188 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 NXF2Q9GZY0 626 aaKnown RBP11.61□□□□□ -0.55
USP48-210ENST00000489108 VSIRQ9H7M9 311 aa11.61□□□□□ -0.55
USP48-210ENST00000489108 TMEM235A6NFC5 223 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 KNCNA6PVL3 124 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 SSX5O60225 188 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 IGHV3-48P01763 117 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 EIF4EP06730 217 aaKnown RBP11.6□□□□□ -0.55
USP48-210ENST00000489108 FCGR2CP31995 323 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 MFAP4P55083 255 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 MSMO1Q15800 293 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 ZBTB34Q8NCN2 500 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 OR13F1Q8NGS4 319 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 LSM10Q969L4 123 aaKnown RBP11.6□□□□□ -0.55
USP48-210ENST00000489108 SLC25A46Q96AG3 418 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 PLEKHA2Q9HB19 425 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 TMEM14BQ9NUH8 114 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 RABAC1Q9UI14 185 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 NSG2Q9Y328 171 aa11.6□□□□□ -0.55
USP48-210ENST00000489108 TRAV2A0A0B4J234 112 aa11.59□□□□□ -0.55
USP48-210ENST00000489108 PDCD5O14737 125 aa11.59□□□□□ -0.55
USP48-210ENST00000489108 NPY1RP25929 384 aa11.59□□□□□ -0.55
USP48-210ENST00000489108 CATR1Q13166 79 aa11.59□□□□□ -0.55
USP48-210ENST00000489108 TOMM20LQ6UXN7 152 aa11.59□□□□□ -0.55
USP48-210ENST00000489108 Q8N1X5 172 aa11.59□□□□□ -0.55
USP48-210ENST00000489108 OR51H1Q8NH63 302 aa11.59□□□□□ -0.55
USP48-210ENST00000489108 SLC5A7Q9GZV3 580 aa11.59□□□□□ -0.55
USP48-210ENST00000489108 OR51B2Q9Y5P1 312 aa11.59□□□□□ -0.55
USP48-210ENST00000489108 I3L2K1 104 aa11.58□□□□□ -0.56
USP48-210ENST00000489108 UBE2UQ5VVX9 321 aa11.58□□□□□ -0.56
USP48-210ENST00000489108 MISP3Q96FF7 219 aa11.58□□□□□ -0.56
USP48-210ENST00000489108 TXN2Q99757 166 aa11.58□□□□□ -0.56
USP48-210ENST00000489108 GINS3Q9BRX5 216 aa11.58□□□□□ -0.56
USP48-210ENST00000489108 ACOT13Q9NPJ3 140 aa11.58□□□□□ -0.56
USP48-210ENST00000489108 C8orf4Q9NR00 106 aa11.58□□□□□ -0.56
USP48-210ENST00000489108 NACAE9PAV3 2078 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 TRAV1-2A0A0B4J238 106 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 PPYP01298 95 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 GNG2P59768 71 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 ERVK-16P61578 105 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 TNP2Q05952 138 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 MLLT11Q13015 90 aaPredicted RBP11.57□□□□□ -0.56
USP48-210ENST00000489108 ACTL10Q5JWF8 245 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 ZNF818PQ6ZRF7 136 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 OR1P1Q8NH06 330 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 SCRT2Q9NQ03 307 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 SCN3BQ9NY72 215 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 COMMD9Q9P000 198 aa11.57□□□□□ -0.56
USP48-210ENST00000489108 K7EQG2 157 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 592 ms