RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 LCA10Q71F78 164 aa2.19□□□□□ -2.06
PRPF4-203ENST00000488937 MIR7-3HGQ8N6C7 128 aa2.19□□□□□ -2.06
PRPF4-203ENST00000488937 C1orf54Q8WWF1 131 aa2.19□□□□□ -2.06
PRPF4-203ENST00000488937 H1FXQ92522 213 aaKnown RBP2.19□□□□□ -2.06
PRPF4-203ENST00000488937 IP6K3Q96PC2 410 aa2.19□□□□□ -2.06
PRPF4-203ENST00000488937 HSPB8Q9UJY1 196 aa2.19□□□□□ -2.06
PRPF4-203ENST00000488937 MED31Q9Y3C7 131 aa2.19□□□□□ -2.06
PRPF4-203ENST00000488937 RPRD2Q5VT52 1461 aaKnown RBP2.19□□□□□ -2.06
PRPF4-203ENST00000488937 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.18□□□□□ -2.06
PRPF4-203ENST00000488937 TRBV6-6A0A0A6YYG2 114 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 LEUTXA8MZ59 168 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 C5orf58C9J3I9 102 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 F8W036 122 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 PANO1I0J062 215 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 PHOX2AO14813 284 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 LECT2O14960 151 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 DLEU1O43261 78 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 SMIM24O75264 130 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 NDUFB2O95178 105 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 IFNA10P01566 189 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 IGKV1D-33P01593 117 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 IGKV1-33P01594 117 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 SCTP09683 121 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 CCL3P10147 92 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 BCL2P10415 239 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 AKR1C2P52895 323 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 C10orf91Q5T1B1 145 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 FKBP1CQ5VVH2 108 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 SSX8Q7RTT4 187 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 SPATA12Q7Z6I5 190 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 PRR15Q8IV56 129 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 DAND5Q8N907 189 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 TMEM229BQ8NBD8 167 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 OR51T1Q8NGJ9 327 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 OR4K15Q8NH41 348 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 CANT1Q8WVQ1 401 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 RBMXL1Q96E39 390 aaKnown RBP2.18□□□□□ -2.06
PRPF4-203ENST00000488937 TEX37Q96LM6 180 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 GPX7Q96SL4 187 aaPredicted RBP2.18□□□□□ -2.06
PRPF4-203ENST00000488937 AICDAQ9GZX7 198 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 TMEM133Q9H2Q1 129 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 TUBA4BQ9H853 241 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 POPDC3Q9HBV1 291 aa2.18□□□□□ -2.06
PRPF4-203ENST00000488937 ZNF318Q5VUA4 2279 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 CDC42BPBQ9Y5S2 1711 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 ZNF646O15015 1829 aaPredicted RBP2.17□□□□□ -2.06
PRPF4-203ENST00000488937 MYH7P12883 1935 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 A0A0D9SEW6 157 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 TRDV1A0A1B0GX56 115 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 ARRDC5A6NEK1 342 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 A8MUU9 505 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 OVOL1O14753 267 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 ZNF73O43830 326 aaPredicted RBP2.17□□□□□ -2.06
PRPF4-203ENST00000488937 BANF1O75531 89 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 TNFSF15O95150 251 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 TRGV3P03979 118 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 PRM2P04554 102 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 LINC00869P0C866 280 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 P0DMU3 169 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 FAM231AP0DMU4 169 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 FAM231CP0DMU5 169 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 HIST1H2BOP23527 126 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 FKBP2P26885 142 aaKnown RBP2.17□□□□□ -2.06
PRPF4-203ENST00000488937 PSMB8P28062 276 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 HIST1H2BBP33778 126 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 HIST1H2BDP58876 126 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 HIST1H2BCP62807 126 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 HIST2H2BEQ16778 126 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 RRN3P1Q2M238 152 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.17□□□□□ -2.06
PRPF4-203ENST00000488937 Q5XG85 94 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 RPL22L1Q6P5R6 122 aaKnown RBP2.17□□□□□ -2.06
PRPF4-203ENST00000488937 AMTNQ6UX39 209 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 HRCT1Q6UXD1 115 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 Q6ZR54 194 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 C3orf22Q8N5N4 141 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 PACRGLQ8N7B6 248 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 OR5C1Q8NGR4 320 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 FNDC9Q8TBE3 224 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 DNAJC9Q8WXX5 260 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 ACOT12Q8WYK0 555 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 HIST1H2BHQ93079 126 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 SLAMF6Q96DU3 332 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 HIST1H2BNQ99877 126 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 HIST1H2BMQ99879 126 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 RNF5Q99942 180 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 DERL1Q9BUN8 251 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 OR2J1Q9GZK6 312 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 GABARAPL1Q9H0R8 117 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 IL36BQ9NZH7 164 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 PCTPQ9UKL6 214 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 LAMTOR2Q9Y2Q5 125 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 BAZ1BQ9UIG0 1483 aaKnown RBP2.17□□□□□ -2.06
PRPF4-203ENST00000488937 PCM1Q15154 2024 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 TUBGCP6Q96RT7 1819 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 NALCNQ8IZF0 1738 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 OVOS2A0A0J9YW53 1432 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 OVOS2Q6IE36 1432 aa2.17□□□□□ -2.06
PRPF4-203ENST00000488937 ROCK2O75116 1388 aaKnown RBP2.16□□□□□ -2.06
PRPF4-203ENST00000488937 IGKV1OR2-108A0A075B7D4 117 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms