RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 GALNT14Q96FL9 552 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 ELOVL1Q9BW60 279 aa11.59□□□□□ -0.55
CXCL12-207ENST00000488591 TRBV7-1A0A0A6YYK4 115 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 WIPF1O43516 503 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 IFNA17P01571 189 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 P0C879 139 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 IL7P13232 177 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 SRPXP78539 464 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 ERHP84090 104 aaKnown RBP11.58□□□□□ -0.56
CXCL12-207ENST00000488591 PRCDQ00LT1 54 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 RBMS2Q15434 407 aaKnown RBP11.58□□□□□ -0.56
CXCL12-207ENST00000488591 IZUMO4Q1ZYL8 232 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 TMEM230Q96A57 120 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 SDHCQ99643 169 aaPredicted RBP11.58□□□□□ -0.56
CXCL12-207ENST00000488591 C7orf50Q9BRJ6 194 aaKnown RBP11.58□□□□□ -0.56
CXCL12-207ENST00000488591 PLEKHA3Q9HB20 300 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 F11RQ9Y624 299 aaKnown RBP11.58□□□□□ -0.56
CXCL12-207ENST00000488591 TMEM56-RWDD3S4R434 201 aa11.58□□□□□ -0.56
CXCL12-207ENST00000488591 A0A0B4J293 547 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 LINC00854A0A1B0GVQ3 168 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 SAP30O75446 220 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 EGFEM1PQ0D2K5 195 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 KLF5Q13887 457 aaPredicted RBP11.57□□□□□ -0.56
CXCL12-207ENST00000488591 TMEM187Q14656 261 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 TMEM128Q5BJH2 165 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 LGI3Q8N145 548 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 SLC35G3Q8N808 338 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 S100ZQ8WXG8 99 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 ENY2Q9NPA8 101 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.57□□□□□ -0.56
CXCL12-207ENST00000488591 CACFD1Q9UGQ2 172 aa11.57□□□□□ -0.56
CXCL12-207ENST00000488591 ST8SIA3O43173 380 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 TRBV12-3P01733 135 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 PRB2P02812 416 aaPredicted RBP11.56□□□□□ -0.56
CXCL12-207ENST00000488591 VAMP1P23763 118 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 CCR6P51684 374 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 PDLIM3Q53GG5 364 aaPredicted RBP11.56□□□□□ -0.56
CXCL12-207ENST00000488591 ACSM6Q6P461 480 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 CLEC19AQ6UXS0 136 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 CENPSQ8N2Z9 138 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 OR2C3Q8N628 320 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 OR1P1Q8NH06 330 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 LHFPL5Q8TAF8 219 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 OR4C12Q96R67 309 aa11.56□□□□□ -0.56
CXCL12-207ENST00000488591 A0A0G2JRQ6 117 aa11.55□□□□□ -0.56
CXCL12-207ENST00000488591 GGCTO75223 188 aaKnown RBP11.55□□□□□ -0.56
CXCL12-207ENST00000488591 IGHV3-23P01764 117 aa11.55□□□□□ -0.56
CXCL12-207ENST00000488591 ARL3P36405 182 aa11.55□□□□□ -0.56
CXCL12-207ENST00000488591 SNCAP37840 140 aa11.55□□□□□ -0.56
CXCL12-207ENST00000488591 SYNJ2BPP57105 145 aa11.55□□□□□ -0.56
CXCL12-207ENST00000488591 SUPT4H1P63272 117 aaKnown RBP11.55□□□□□ -0.56
CXCL12-207ENST00000488591 VN1R17PQ8TDU5 208 aa11.55□□□□□ -0.56
CXCL12-207ENST00000488591 GPR146Q96CH1 333 aa11.55□□□□□ -0.56
CXCL12-207ENST00000488591 AURKAIP1Q9NWT8 199 aaPredicted RBP11.55□□□□□ -0.56
CXCL12-207ENST00000488591 PTTG2Q9NZH5 202 aa11.55□□□□□ -0.56
CXCL12-207ENST00000488591 S4R3C0 116 aa11.55□□□□□ -0.56
CXCL12-207ENST00000488591 A0A0B4J2A0 478 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 PPP5D1E7EU14 171 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 BMPR1BO00238 502 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 NDUFB6O95139 128 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 CLEC3BP05452 202 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 HOXA1P49639 335 aaPredicted RBP11.54□□□□□ -0.56
CXCL12-207ENST00000488591 SUB1P53999 127 aaKnown RBP eCLIP11.54□□□□□ -0.56
CXCL12-207ENST00000488591 KRTAP10-11P60412 298 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 SPCS3P61009 180 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 UBE2MP61081 183 aaKnown RBP11.54□□□□□ -0.56
CXCL12-207ENST00000488591 SPINK9Q5DT21 86 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 Q6ZRM9 215 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 OR9G4Q8NGQ1 327 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 OR52E5Q8NH55 327 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 CCDC32Q9BV29 185 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 PRR13Q9NZ81 148 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 PEMTQ9UBM1 199 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 CACNG5Q9UF02 275 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 SHPKQ9UHJ6 478 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 DMRT1Q9Y5R6 373 aa11.54□□□□□ -0.56
CXCL12-207ENST00000488591 DUXBA0A1W2PPF3 345 aa11.53□□□□□ -0.56
CXCL12-207ENST00000488591 MFSD2BA6NFX1 497 aa11.53□□□□□ -0.56
CXCL12-207ENST00000488591 INS-IGF2F8WCM5 200 aa11.53□□□□□ -0.56
CXCL12-207ENST00000488591 SULT1A3P0DMM9 295 aa11.53□□□□□ -0.56
CXCL12-207ENST00000488591 SULT1A4P0DMN0 295 aa11.53□□□□□ -0.56
CXCL12-207ENST00000488591 ZNF114Q8NC26 417 aa11.53□□□□□ -0.56
CXCL12-207ENST00000488591 ZNF502Q8TBZ5 544 aa11.53□□□□□ -0.56
CXCL12-207ENST00000488591 MRAPQ8TCY5 172 aa11.53□□□□□ -0.56
CXCL12-207ENST00000488591 MISP3Q96FF7 219 aa11.53□□□□□ -0.56
CXCL12-207ENST00000488591 CCDC140Q96MF4 163 aa11.53□□□□□ -0.56
CXCL12-207ENST00000488591 OR2C1O95371 312 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 SFT2D2O95562 160 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 MFAP2P55001 183 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 PPP1R1AQ13522 171 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 FAM106AQ4KMX7 169 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 AARDQ4LEZ3 155 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 PLET1Q6UQ28 207 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 LYZL2Q7Z4W2 148 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 GPHB5Q86YW7 130 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 SCARB1Q8WTV0 552 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 ATP6V0BQ99437 205 aa11.52□□□□□ -0.57
CXCL12-207ENST00000488591 WDR12Q9GZL7 423 aaKnown RBP11.52□□□□□ -0.57
CXCL12-207ENST00000488591 GAR1Q9NY12 217 aaKnown RBP11.52□□□□□ -0.57
CXCL12-207ENST00000488591 C21orf62Q9NYP8 219 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms