RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 IGHV3-11P01762 117 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 SNCAP37840 140 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 SPCS3P61009 180 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 RHOGP84095 191 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 SLC25A24Q6NUK1 477 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 C18orf65Q6ZTR6 163 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 NECAP1Q8NC96 275 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 OR52B4Q8NGK2 314 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 OR1L6Q8NGR2 347 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 C4orf3Q8WVX3 66 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 DPF1Q92782 380 aa12.24□□□□□ -0.45
C9orf3-219ENST00000488186 GPN1Q9HCN4 374 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-219ENST00000488186 FAM223BA6NKX1 122 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 INMT-MINDY4F8WBC2 141 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 TSPAN15O95858 294 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 SUB1P53999 127 aaKnown RBP eCLIP12.23□□□□□ -0.45
C9orf3-219ENST00000488186 WT1-ASQ06250 92 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 KIAA0141Q14154 515 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-219ENST00000488186 NMSQ5H8A3 153 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 FAM223AQ8IWN6 122 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 OR52E5Q8NH55 327 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 MYOZ3Q8TDC0 251 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 ZNF431Q8TF32 576 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-219ENST00000488186 SEC22CQ9BRL7 303 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 GNB4Q9HAV0 340 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 FBXL7Q9UJT9 491 aa12.23□□□□□ -0.45
C9orf3-219ENST00000488186 NBEAL1Q6ZS30 2694 aa12.22□□□□□ -0.45
C9orf3-219ENST00000488186 NXPH3O95157 252 aa12.22□□□□□ -0.45
C9orf3-219ENST00000488186 MYCNOSP40205 109 aa12.22□□□□□ -0.45
C9orf3-219ENST00000488186 GGNBP1Q5YKI7 109 aa12.22□□□□□ -0.45
C9orf3-219ENST00000488186 C19orf35Q6ZS72 473 aa12.22□□□□□ -0.45
C9orf3-219ENST00000488186 MITD1Q8WV92 249 aa12.22□□□□□ -0.45
C9orf3-219ENST00000488186 HIPK2Q9H2X6 1198 aa12.22□□□□□ -0.45
C9orf3-219ENST00000488186 PALMDQ9NP74 551 aa12.22□□□□□ -0.45
C9orf3-219ENST00000488186 HEYLQ9NQ87 328 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-219ENST00000488186 TRBV9A0A0B4J1U6 114 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 ANKRD34BA5PLL1 514 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 CCL24O00175 119 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 ADAP1O75689 374 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 IL5P05113 134 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 LGALS1P09382 135 aaKnown RBP12.21□□□□□ -0.45
C9orf3-219ENST00000488186 SLC25A6P12236 298 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 DEFA5Q01523 94 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 DCTN2Q13561 401 aaKnown RBP12.21□□□□□ -0.45
C9orf3-219ENST00000488186 DEFB136Q30KP8 78 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 C15orf32Q32M92 178 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 TREML4Q6UXN2 200 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 C12orf45Q8N5I9 185 aaPredicted RBP12.21□□□□□ -0.45
C9orf3-219ENST00000488186 OR2C3Q8N628 320 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 OR11H1Q8NG94 326 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 OR1N2Q8NGR9 330 aa12.21□□□□□ -0.45
C9orf3-219ENST00000488186 F11RQ9Y624 299 aaKnown RBP12.21□□□□□ -0.45
C9orf3-219ENST00000488186 FAM25EA8MYX2 175 aa12.2□□□□□ -0.46
C9orf3-219ENST00000488186 I3L521 148 aa12.2□□□□□ -0.46
C9orf3-219ENST00000488186 PRAF2O60831 178 aa12.2□□□□□ -0.46
C9orf3-219ENST00000488186 RUNX1Q01196 453 aa12.2□□□□□ -0.46
C9orf3-219ENST00000488186 OR1P1Q8NH06 330 aa12.2□□□□□ -0.46
C9orf3-219ENST00000488186 EEF1AKMT3Q96AZ1 226 aa12.2□□□□□ -0.46
C9orf3-219ENST00000488186 RAX2Q96IS3 184 aa12.2□□□□□ -0.46
C9orf3-219ENST00000488186 CXorf58Q96LI9 332 aa12.2□□□□□ -0.46
C9orf3-219ENST00000488186 FANCD2OSQ96PS1 177 aa12.2□□□□□ -0.46
C9orf3-219ENST00000488186 DUX3Q96PT4 197 aa12.2□□□□□ -0.46
C9orf3-219ENST00000488186 IGLV11-55A0A075B6I3 123 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 MED6O75586 246 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 NDUFB8O95169 186 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 PTTG1O95997 202 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 HSPB1P04792 205 aaKnown RBP12.19□□□□□ -0.46
C9orf3-219ENST00000488186 CD33P20138 364 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 TNFRSF9Q07011 255 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 ZNF616Q08AN1 781 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 EXOSC2Q13868 293 aaKnown RBP12.19□□□□□ -0.46
C9orf3-219ENST00000488186 AARDQ4LEZ3 155 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 FAM209BQ5JX69 171 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 MISP3Q96FF7 219 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 P2RX4Q99571 388 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 MARVELD1Q9BSK0 173 aa12.19□□□□□ -0.46
C9orf3-219ENST00000488186 RANGRFQ9HD47 186 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-219ENST00000488186 PEF1Q9UBV8 284 aaKnown RBP12.19□□□□□ -0.46
C9orf3-219ENST00000488186 C5orf51A6NDU8 294 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 INS-IGF2F8WCM5 200 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 LINC01619G3V211 115 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 WRBO00258 174 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 OR8U8P0C7N1 319 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 HTR2BP41595 481 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 IAH1Q2TAA2 248 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-219ENST00000488186 ZNF343Q6P1L6 599 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 DTD1Q8TEA8 209 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 RBKSQ9H477 322 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 GSKIPQ9P0R6 139 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 HSPB7Q9UBY9 170 aa12.18□□□□□ -0.46
C9orf3-219ENST00000488186 TRBV7-1A0A0A6YYK4 115 aa12.17□□□□□ -0.46
C9orf3-219ENST00000488186 FAM90A26D6RGX4 464 aa12.17□□□□□ -0.46
C9orf3-219ENST00000488186 IFNA10P01566 189 aa12.17□□□□□ -0.46
C9orf3-219ENST00000488186 IGHV3-23P01764 117 aa12.17□□□□□ -0.46
C9orf3-219ENST00000488186 RGS21Q2M5E4 152 aa12.17□□□□□ -0.46
C9orf3-219ENST00000488186 PDLIM3Q53GG5 364 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-219ENST00000488186 NOXA1Q86UR1 476 aa12.17□□□□□ -0.46
C9orf3-219ENST00000488186 ZNF114Q8NC26 417 aa12.17□□□□□ -0.46
C9orf3-219ENST00000488186 PINX1Q96BK5 328 aaKnown RBP12.17□□□□□ -0.46
C9orf3-219ENST00000488186 S4R3C0 116 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms