RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 DEFB125Q8N687 156 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 OR4D11Q8NGI4 311 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 PFN4Q8NHR9 129 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 TMEM106AQ96A25 262 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 SMR3AQ99954 134 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 HDHD2Q9H0R4 259 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 MAP1LC3AQ9H492 121 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 EFCAB1Q9HAE3 211 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 PLEKHJ1Q9NW61 149 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 FKBP14Q9NWM8 211 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 NSD3Q9BZ95 1437 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 IGKV1D-42A0A075B6H8 117 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 OR1I1O60431 355 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 HYPMO75409 117 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 TYMSP04818 313 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 MIFP14174 115 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 FKBP2P26885 142 aaKnown RBP0.05□□□□□ -2.4
SMC4-219ENST00000487747 BRS3P32247 399 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 MAP2K4P45985 399 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 UBE2G2P60604 165 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 CNBPP62633 177 aaKnown RBP0.05□□□□□ -2.4
SMC4-219ENST00000487747 BATFQ16520 125 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 GUK1Q16774 197 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 GDF5OSQ5U4N7 250 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 COMMD7Q86VX2 200 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 LINC00311Q8N616 119 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 AMELYQ99218 206 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 KLK9Q9UKQ9 250 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 C15orf41Q9Y2V0 281 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 NAV2Q8IVL1 2488 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 ABCC11Q96J66 1382 aa0.05□□□□□ -2.4
SMC4-219ENST00000487747 COL1A1P02452 1464 aaPredicted RBP0.04□□□□□ -2.4
SMC4-219ENST00000487747 ZNF518AQ6AHZ1 1483 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 DSTQ03001 7570 aaKnown RBP0.04□□□□□ -2.4
SMC4-219ENST00000487747 KCPQ6ZWJ8 1503 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 FAM25EA8MYX2 175 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 GOLGA8KD6RF30 607 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 SSNA1O43805 119 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 ASAH2BP0C7U1 165 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 HMGA1P17096 107 aaKnown RBP0.04□□□□□ -2.4
SMC4-219ENST00000487747 RPL12P30050 165 aaKnown RBP0.04□□□□□ -2.4
SMC4-219ENST00000487747 MARCKSL1P49006 195 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 EIF2B2P49770 351 aaKnown RBP0.04□□□□□ -2.4
SMC4-219ENST00000487747 RAB4BP61018 213 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 MLLT11Q13015 90 aaPredicted RBP0.04□□□□□ -2.4
SMC4-219ENST00000487747 SRSF6Q13247 344 aaKnown RBP0.04□□□□□ -2.4
SMC4-219ENST00000487747 MED21Q13503 144 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 RSU1Q15404 277 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 PLEKHG7Q6ZR37 379 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 SLC51BQ86UW2 128 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 PHF13Q86YI8 300 aaPredicted RBP0.04□□□□□ -2.4
SMC4-219ENST00000487747 TMEM156Q8N614 296 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 WFDC11Q8NEX6 87 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 CMTM5Q96DZ9 223 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 DIRAS2Q96HU8 199 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 CNBD2Q96M20 576 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 LINC01600Q96MT4 127 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 C7orf50Q9BRJ6 194 aaKnown RBP0.04□□□□□ -2.4
SMC4-219ENST00000487747 SLC50A1Q9BRV3 221 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 TMEM70Q9BUB7 260 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 DERL1Q9BUN8 251 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 NDEL1Q9GZM8 345 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 CKLFQ9UBR5 152 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 DENND4CQ5VZ89 1909 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 ROBO3Q96MS0 1386 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 PEAK1Q9H792 1746 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 ADGRL3Q9HAR2 1447 aa0.04□□□□□ -2.4
SMC4-219ENST00000487747 CEP164Q9UPV0 1460 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 FRAS1Q86XX4 4008 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 TRBV20OR9-2A0A075B6H5 130 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 A0A0J9YY10 115 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 A0A1B0GX78 115 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 EVPLLA8MZ36 301 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 INMT-MINDY4F8WBC2 141 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 PFDN6O15212 129 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 ACOX3O15254 700 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 SNRNP200O75643 2136 aaKnown RBP0.03□□□□□ -2.4
SMC4-219ENST00000487747 IGKV1-5P01602 117 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 KLK9Q2XQG4 91 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 C1orf195Q5TG92 126 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 AADACL3Q5VUY0 350 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 SFXN4Q6P4A7 337 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 ALKAL1Q6UXT8 129 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 MIXL1Q9H2W2 232 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 C3orf18Q9UK00 162 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 RTL1A6NKG5 1358 aa0.03□□□□□ -2.4
SMC4-219ENST00000487747 ARHGAP31Q2M1Z3 1444 aa0.03□□□□□ -2.41
SMC4-219ENST00000487747 SMG6Q86US8 1419 aaKnown RBP0.03□□□□□ -2.41
SMC4-219ENST00000487747 MIA2Q96PC5 1412 aa0.03□□□□□ -2.41
SMC4-219ENST00000487747 YTHDC2Q9H6S0 1430 aaKnown RBP0.03□□□□□ -2.41
SMC4-219ENST00000487747 CNTLNQ9NXG0 1405 aa0.03□□□□□ -2.41
SMC4-219ENST00000487747 C1orf167Q5SNV9 1468 aa0.03□□□□□ -2.41
SMC4-219ENST00000487747 ZCCHC6Q5VYS8 1495 aaKnown RBP0.03□□□□□ -2.41
SMC4-219ENST00000487747 RALGAPBQ86X10 1494 aa0.03□□□□□ -2.41
SMC4-219ENST00000487747 SCN3AQ9NY46 2000 aa0.03□□□□□ -2.41
SMC4-219ENST00000487747 TOPBP1Q92547 1522 aa0.03□□□□□ -2.41
SMC4-219ENST00000487747 DCAF1Q9Y4B6 1507 aa0.03□□□□□ -2.41
SMC4-219ENST00000487747 KIF13BQ9NQT8 1826 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 CXCR6O00574 342 aa0.02□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP2-3P0C7H8 128 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms