RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 THYN1Q9P016 225 aa12.78□□□□□ -0.36
HLA-DQB1-209ENST00000487676 FZR1Q9UM11 496 aa12.78□□□□□ -0.36
HLA-DQB1-209ENST00000487676 SVILO95425 2214 aa12.78□□□□□ -0.36
HLA-DQB1-209ENST00000487676 MT-CO3P00414 261 aa12.78□□□□□ -0.36
HLA-DQB1-209ENST00000487676 AREGP15514 252 aa12.78□□□□□ -0.36
HLA-DQB1-209ENST00000487676 PAX2Q02962 417 aa12.77□□□□□ -0.36
HLA-DQB1-209ENST00000487676 TMEM144Q7Z5S9 345 aa12.77□□□□□ -0.36
HLA-DQB1-209ENST00000487676 HILPDAQ9Y5L2 63 aa12.77□□□□□ -0.36
HLA-DQB1-209ENST00000487676 hDV102S1A0JD36 115 aa12.77□□□□□ -0.36
HLA-DQB1-209ENST00000487676 PLAUP00749 431 aa12.77□□□□□ -0.36
HLA-DQB1-209ENST00000487676 ATP5L2Q7Z4Y8 100 aa12.77□□□□□ -0.36
HLA-DQB1-209ENST00000487676 PRNTQ86SH4 94 aa12.77□□□□□ -0.36
HLA-DQB1-209ENST00000487676 HARBI1Q96MB7 349 aa12.77□□□□□ -0.36
HLA-DQB1-209ENST00000487676 LINC00470Q9BZP3 86 aa12.77□□□□□ -0.36
HLA-DQB1-209ENST00000487676 ASXL3Q9C0F0 2248 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 YPEL1O60688 119 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 CNIH1O95406 144 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 IL18BPO95998 194 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 YPEL2Q96QA6 119 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 NPIPB11E5RHQ5 1161 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 LYZL6O75951 148 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 ESDP10768 282 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 LYZP61626 148 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 ANKRD39Q53RE8 183 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 C1orf185Q5T7R7 199 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SPEM1Q8N4L4 309 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TMEM186Q96B77 213 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 FER1L6-AS2Q96M78 137 aa12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 RPP21Q9H633 154 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB1-209ENST00000487676 DLL1O00548 723 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 APOHP02749 345 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SCGB1C2P0DMR2 95 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 MPV17P39210 176 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SEPSECSQ9HD40 501 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 A0A087X0K7 114 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 IGHV5-10-1A0A0J9YXX1 117 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SYS1-DBNDD2H3BUS1 97 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 IGLL1P15814 213 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SMAGPQ0VAQ4 97 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SPINK14Q6IE38 97 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 Q6ZVH6 145 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 C18orf32Q8TCD1 76 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 IGLV3-12A0A075B6K2 115 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 IGHV1-45A0A0A0MS14 117 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TNFSF15O95150 251 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 CENPVQ7Z7K6 275 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 OR4X2Q8NGF9 303 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 MGST2Q99735 147 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 hADV38S2A0JD32 116 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 C3orf80F5H4A9 247 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 BMI1P35226 326 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 PCOLCEQ15113 449 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TMEM116Q8NCL8 245 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 FGFBP3Q8TAT2 258 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 ZNF414Q96IQ9 312 aa12.76□□□□□ -0.37
HLA-DQB1-209ENST00000487676 C15orf62A8K5M9 175 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 IGKV1-39P01597 117 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 RBP4P02753 201 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 IGKV1D-39P04432 117 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 PSG9Q00887 426 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 ALKBH6Q3KRA9 238 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SPATA31B1PQ5VZV4 182 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 RBPMS2Q6ZRY4 209 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 PHF7Q9BWX1 381 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 CRISPLD2Q9H0B8 497 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SRFP11831 508 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 CLDN18P56856 261 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 RPL30P62888 115 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 C11orf1Q9H5F2 150 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 K7EP13 123 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 OR9G9P0C7N8 305 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TICRRQ7Z2Z1 1910 aa12.75□□□□□ -0.37
HLA-DQB1-209ENST00000487676 C2CD4DB7Z1M9 353 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 RPS20P60866 119 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 GPR82Q96P67 336 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 FAM90A9PA6NNJ1 464 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SPRY3O43610 288 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 HSD52Q0P140 79 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 PSMG4Q5JS54 123 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SRSF12Q8WXF0 261 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TRGV5A0A0B4J1U4 118 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 F2Z2F3 143 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 ETV2O00321 342 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 GATA2P23769 480 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 C20orf204Q6ZNR8 217 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 OR52E5Q8NH55 327 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 IGLC7A0M8Q6 106 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TCF24Q7RTU0 167 aa12.74□□□□□ -0.37
HLA-DQB1-209ENST00000487676 A0A0G2JLM5 398 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 RSPO1Q2MKA7 263 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TIAF1O95411 115 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 MUC15Q8N387 334 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 FER1L6-AS1Q8NA97 138 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TMEM238C9JI98 176 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 J3QW42 95 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 RPL39P5Q59GN2 51 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TIMM23BQ5SRD1 257 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 A0A1B0GUT8 65 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 FAM71F2Q6NXP2 309 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms