RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 PHLDA3Q9Y5J5 127 aa1.08□□□□□ -2.24
USP9X-208ENST00000487625 NALCNQ8IZF0 1738 aa1.08□□□□□ -2.24
USP9X-208ENST00000487625 TOPBP1Q92547 1522 aa1.08□□□□□ -2.24
USP9X-208ENST00000487625 CCDC171Q6TFL3 1326 aa1.08□□□□□ -2.24
USP9X-208ENST00000487625 SCN2AQ99250 2005 aa1.08□□□□□ -2.24
USP9X-208ENST00000487625 BRWD3Q6RI45 1802 aa1.08□□□□□ -2.24
USP9X-208ENST00000487625 PIKFYVEQ9Y2I7 2098 aa1.08□□□□□ -2.24
USP9X-208ENST00000487625 DOCK5Q9H7D0 1870 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 OVOS2A0A0J9YW53 1432 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 OVOS2Q6IE36 1432 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 PRG4Q92954 1404 aaPredicted RBP1.07□□□□□ -2.24
USP9X-208ENST00000487625 ERBINQ96RT1 1412 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 LOXHD1Q8IVV2 1947 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 TRBV20OR9-2A0A075B6H5 130 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 IGKV1OR2-108A0A075B7D4 117 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 IGKV1D-43A0A0B4J1Z2 117 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 A0A0D9SEW6 157 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 TRBV7-6A0A0J9YX20 115 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 A0A1W2PP18 115 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 DHRS12A0PJE2 317 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 RIIAD1A6NNX1 92 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 A8MUU9 505 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 LY6LH3BQJ8 138 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 K7ERS5 55 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 LECT2O14960 151 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 CRYZL1O95825 349 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 IGKV1D-33P01593 117 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 IGKV1-33P01594 117 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 HLA-DQB1P01920 261 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 HTR1AP08908 422 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 LINC00869P0C866 280 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 MPC1LP0DKB6 136 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 OGNP20774 298 aaKnown RBP1.07□□□□□ -2.24
USP9X-208ENST00000487625 S100A1P23297 94 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 HIST1H2BOP23527 126 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 HIST1H2BBP33778 126 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 CA5AP35218 305 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 CCR2P41597 374 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 AKR1C3P42330 323 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 CCR6P51684 374 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 AQP4P55087 323 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 PIGPP57054 158 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 HIST1H2BDP58876 126 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 TSPEAR-AS2P59090 65 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 HIST1H2BCP62807 126 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 BSPH1Q075Z2 132 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 MOBPQ13875 183 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 OR8B8Q15620 311 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 LY6EQ16553 131 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 HIST2H2BEQ16778 126 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 DEFB116Q30KQ4 102 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.07□□□□□ -2.24
USP9X-208ENST00000487625 RPL22L1Q6P5R6 122 aaKnown RBP1.07□□□□□ -2.24
USP9X-208ENST00000487625 AGTRAPQ6RW13 159 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 LCA10Q71F78 164 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 SSX8Q7RTT4 187 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 LINC01551Q86U37 167 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 DYNAPQ8N1N2 210 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 TMEM86AQ8N2M4 240 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 TMEM105Q8N8V8 129 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 ST20-AS1Q8NBB2 130 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 APCDD1LQ8NCL9 501 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 OR10G2Q8NGC3 310 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 CLDND2Q8NHS1 167 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 RPS4Y2Q8TD47 263 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 C2orf15Q8WU43 125 aaKnown RBP1.07□□□□□ -2.24
USP9X-208ENST00000487625 H1FXQ92522 213 aaKnown RBP1.07□□□□□ -2.24
USP9X-208ENST00000487625 HIST1H2BHQ93079 126 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 SLAMF6Q96DU3 332 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 HIST1H2BNQ99877 126 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 HIST1H2BMQ99879 126 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 C2orf88Q9BSF0 95 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 C1orf50Q9BV19 199 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 CCDC32Q9BV29 185 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 PBDC1Q9BVG4 233 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 CCDC90BQ9GZT6 254 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 FAM107BQ9H098 131 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 C11orf68Q9H3H3 251 aaKnown RBP1.07□□□□□ -2.24
USP9X-208ENST00000487625 EFCAB1Q9HAE3 211 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 TMEM138Q9NPI0 162 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 ZNF230Q9UIE0 474 aaPredicted RBP1.07□□□□□ -2.24
USP9X-208ENST00000487625 CYSLTR1Q9Y271 337 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 MED31Q9Y3C7 131 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 DSCAML1Q8TD84 2053 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 CACNA1SQ13698 1873 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 RALGAPA2Q2PPJ7 1873 aa1.07□□□□□ -2.24
USP9X-208ENST00000487625 OVOS2A0A0G2JMS6 1433 aa1.06□□□□□ -2.24
USP9X-208ENST00000487625 KDM6AO15550 1401 aaPredicted RBP1.06□□□□□ -2.24
USP9X-208ENST00000487625 MYOM3Q5VTT5 1437 aa1.06□□□□□ -2.24
USP9X-208ENST00000487625 SMG6Q86US8 1419 aaKnown RBP1.06□□□□□ -2.24
USP9X-208ENST00000487625 SLIT3O75094 1523 aa1.06□□□□□ -2.24
USP9X-208ENST00000487625 MED1Q15648 1581 aaPredicted RBP1.06□□□□□ -2.24
USP9X-208ENST00000487625 IGLV4-69A0A075B6H9 119 aa1.06□□□□□ -2.24
USP9X-208ENST00000487625 TRAV9-1A0A075B6T8 112 aa1.06□□□□□ -2.24
USP9X-208ENST00000487625 IGHV3-15A0A0B4J1V0 119 aa1.06□□□□□ -2.24
USP9X-208ENST00000487625 TRAV5A0A0B4J249 113 aa1.06□□□□□ -2.24
USP9X-208ENST00000487625 TRAV41A0A0B4J266 112 aa1.06□□□□□ -2.24
USP9X-208ENST00000487625 TRDV1A0A1B0GX56 115 aa1.06□□□□□ -2.24
USP9X-208ENST00000487625 DUXBA0A1W2PPF3 345 aa1.06□□□□□ -2.24
USP9X-208ENST00000487625 TLCD2A6NGC4 264 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms