RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 TMSB15BA0A087X1C1 80 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 TRAV38-1A0A0B4J264 116 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 FUOMA2VDF0 154 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 HAND1O96004 215 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 IFNA21P01568 189 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 HLA-DRB1P01911 266 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 C1QAP02745 245 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 TFPTP0C1Z6 253 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 RPL28P46779 137 aaKnown RBP2.47□□□□□ -2.01
CUL3-211ENST00000487558 TFAMQ00059 246 aaKnown RBP2.47□□□□□ -2.01
CUL3-211ENST00000487558 DYNAPQ8N1N2 210 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 MRPL30Q8TCC3 161 aaKnown RBP2.47□□□□□ -2.01
CUL3-211ENST00000487558 RASSF5Q8WWW0 418 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 ACOT12Q8WYK0 555 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 KLK6Q92876 244 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 PPP1R2P1Q96PQ5 205 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 SIGMAR1Q99720 223 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 ULBP3Q9BZM4 244 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 IL36BQ9NZH7 164 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 DOK5Q9P104 306 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 NAT8Q9UHE5 227 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 MTUS2Q5JR59 1369 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 HIVEP2P31629 2446 aa2.47□□□□□ -2.01
CUL3-211ENST00000487558 MYH3P11055 1940 aa2.46□□□□□ -2.02
CUL3-211ENST00000487558 H7C2G1 150 aa2.46□□□□□ -2.02
CUL3-211ENST00000487558 CCL5P13501 91 aa2.46□□□□□ -2.02
CUL3-211ENST00000487558 HIST1H3AP68431 136 aa2.46□□□□□ -2.02
CUL3-211ENST00000487558 H3F3AP84243 136 aa2.46□□□□□ -2.02
CUL3-211ENST00000487558 ARHGAP11BQ3KRB8 267 aa2.46□□□□□ -2.02
CUL3-211ENST00000487558 ZHX1-C8orf76Q96EF9 292 aa2.46□□□□□ -2.02
CUL3-211ENST00000487558 ERMAPQ96PL5 475 aaPredicted RBP2.46□□□□□ -2.02
CUL3-211ENST00000487558 DOHHQ9BU89 302 aa2.46□□□□□ -2.02
CUL3-211ENST00000487558 PKIGQ9Y2B9 76 aa2.46□□□□□ -2.02
CUL3-211ENST00000487558 FAM32AQ9Y421 112 aaKnown RBP2.46□□□□□ -2.02
CUL3-211ENST00000487558 DENND4BO75064 1496 aaPredicted RBP2.45□□□□□ -2.02
CUL3-211ENST00000487558 SYNMO15061 1565 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 CCDC144AA2RUR9 1427 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 WRNQ14191 1432 aaPredicted RBP eCLIP2.45□□□□□ -2.02
CUL3-211ENST00000487558 GGT3PA6NGU5 568 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 PRM2P04554 102 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 HLA-DMBP28068 263 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 RPL5P46777 297 aaKnown RBP2.45□□□□□ -2.02
CUL3-211ENST00000487558 CCL20P78556 96 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 DEFB103AP81534 67 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 TSNQ15631 228 aaKnown RBP2.45□□□□□ -2.02
CUL3-211ENST00000487558 ZNF791Q3KP31 576 aaPredicted RBP2.45□□□□□ -2.02
CUL3-211ENST00000487558 LPCAT3Q6P1A2 487 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 ANKRD29Q8N6D5 301 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 TIMM21Q9BVV7 248 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 BOLA2Q9H3K6 86 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 BIN3Q9NQY0 253 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 ARMC1Q9NVT9 282 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 MRPL27Q9P0M9 148 aaKnown RBP2.45□□□□□ -2.02
CUL3-211ENST00000487558 SMPXQ9UHP9 88 aa2.45□□□□□ -2.02
CUL3-211ENST00000487558 MYH2Q9UKX2 1941 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 STRCP1A6NGW2 1772 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 IGHV1-18A0A0C4DH31 117 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 IRGMA1A4Y4 181 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 TSTD3H0UI37 97 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 OR7C1O76099 320 aaPredicted RBP2.44□□□□□ -2.02
CUL3-211ENST00000487558 ATG12O94817 140 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 DHFRP00374 187 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 IFNA1P01562 189 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 IGHV3-7P01780 117 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 TTRP02766 147 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 SULT1A3P0DMM9 295 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 SULT1A4P0DMN0 295 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 IFI30P13284 250 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 CRYBA4P53673 196 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 TCTAP57738 103 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 TAS2R41P59536 307 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 RPL18Q07020 188 aaKnown RBP2.44□□□□□ -2.02
CUL3-211ENST00000487558 SMCO1Q147U7 214 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 CDK10Q15131 360 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 RPP25LQ8N5L8 163 aaKnown RBP2.44□□□□□ -2.02
CUL3-211ENST00000487558 ZNF676Q8N7Q3 588 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 C12orf29Q8N999 325 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 MCFD2Q8NI22 146 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 BORCS7Q96B45 105 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 OR8D2Q9GZM6 311 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 DCSTAMPQ9H295 470 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 ENY2Q9NPA8 101 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 CISHQ9NSE2 258 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 OPTCQ9UBM4 332 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 PRELID3BQ9Y3B1 194 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 KIF24Q5T7B8 1368 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 ITGB4P16144 1822 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 PXDNLA1KZ92 1463 aa2.44□□□□□ -2.02
CUL3-211ENST00000487558 PPP5D1E7EU14 171 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 PPBPP02775 128 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 HIST1H2BOP23527 126 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 SERPINB1P30740 379 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 HIST1H2BBP33778 126 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 HIST1H2BDP58876 126 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 HIST1H2BCP62807 126 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 KCNJ8Q15842 424 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 HIST2H2BEQ16778 126 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 TPRXLQ17RH7 258 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms