RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 PRSS3P35030 304 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 LSM3P62310 102 aaKnown RBP9.06□□□□□ -0.96
VPS16-208ENST00000487461 TMEM69Q5SWH9 247 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 LINC00299Q6ZSB3 139 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 CMTM1Q8IZ96 169 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 OR6F1Q8NGZ6 308 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 YIPF6Q96EC8 236 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 ZNF414Q96IQ9 312 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 SPAG8Q99932 426 aaPredicted RBP9.06□□□□□ -0.96
VPS16-208ENST00000487461 C20orf24Q9BUV8 137 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 FXYD6Q9H0Q3 95 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 DAZ1Q9NQZ3 744 aaKnown RBP9.06□□□□□ -0.96
VPS16-208ENST00000487461 C21orf62Q9NYP8 219 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 K7EMT4 169 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 GPR31O00270 319 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 NDUFA4O00483 81 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 ZNF207O43670 478 aaKnown RBP9.05□□□□□ -0.96
VPS16-208ENST00000487461 HLA-DMAP28067 261 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 HRH1P35367 487 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 TAS2R46P59540 309 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 EWSR1Q01844 656 aaKnown RBP eCLIP9.05□□□□□ -0.96
VPS16-208ENST00000487461 PHLDA2Q53GA4 152 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 LAMTOR1Q6IAA8 161 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 SPSB3Q6PJ21 355 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 WFDC3Q8IUB2 231 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 CLVS1Q8IUQ0 354 aaPredicted RBP9.05□□□□□ -0.96
VPS16-208ENST00000487461 UBAC2Q8NBM4 344 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 ATP6V0BQ99437 205 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 TMEM14BQ9NUH8 114 aa9.05□□□□□ -0.96
VPS16-208ENST00000487461 A0A0J9YWU9 116 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 SPRY2O43597 315 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 EIF4EP06730 217 aaKnown RBP9.04□□□□□ -0.96
VPS16-208ENST00000487461 CTSGP08311 255 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 APOC4P55056 127 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 ODF3L2Q3SX64 289 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 Q56UQ5 140 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 Q6ZWC4 215 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 OR5B3Q8NH48 314 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 GPX8Q8TED1 209 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 FKBP11Q9NYL4 201 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 PRNDQ9UKY0 176 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 TP53TG1Q9Y2A0 90 aa9.04□□□□□ -0.96
VPS16-208ENST00000487461 C15orf61A6NNL5 157 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 UBE2CO00762 179 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 CTSDP07339 412 aaPredicted RBP9.03□□□□□ -0.96
VPS16-208ENST00000487461 BMI1P35226 326 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 TNFRSF9Q07011 255 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 DEFB135Q30KP9 77 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 LYG2Q86SG7 212 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 OR1P1Q8NH06 330 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 RAB2BQ8WUD1 216 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 SLC25A46Q96AG3 418 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 PPP1R14BQ96C90 147 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 SEC22AQ96IW7 307 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 TMEM56Q96MV1 263 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 SMPXQ9UHP9 88 aa9.03□□□□□ -0.96
VPS16-208ENST00000487461 KIR2DL5BA0A0G2JN68 375 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 KIR2DL5BA0A0G2JPC4 375 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 CXorf65A6NEN9 183 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 C15orf62A8K5M9 175 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 H3BMQ9 156 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 I3L2K1 104 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 CHEK1O14757 476 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 NOL3O60936 208 aaKnown RBP9.02□□□□□ -0.97
VPS16-208ENST00000487461 IGKV1-39P01597 117 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 IGKV1D-39P04432 117 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 RPL35AP18077 110 aaKnown RBP9.02□□□□□ -0.97
VPS16-208ENST00000487461 TSPAN5P62079 268 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 PMS2P11Q13670 270 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 LPCAT3Q6P1A2 487 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 TBC1D26Q86UD7 250 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 KIR2DL5AQ8N109 375 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 KIR2DL5BQ8NHK3 375 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 RNF183Q96D59 192 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 MISP3Q96FF7 219 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 RNF2Q99496 336 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 RHPN1-AS1Q9BWJ2 59 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 FAM212BQ9NTI7 297 aaPredicted RBP9.02□□□□□ -0.97
VPS16-208ENST00000487461 COMMD3Q9UBI1 195 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 ALMS1Q8TCU4 4167 aa9.02□□□□□ -0.97
VPS16-208ENST00000487461 IGHV3-49A0A0A0MS15 119 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 IGHV7-4-1A0A0J9YVY3 117 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 OR4C46A6NHA9 309 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 NUPL2O15504 423 aaKnown RBP9.01□□□□□ -0.97
VPS16-208ENST00000487461 IGHV3-48P01763 117 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 FCGR2BP31994 310 aaPredicted RBP9.01□□□□□ -0.97
VPS16-208ENST00000487461 MFAP4P55083 255 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 UCP3P55916 312 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 H2BFWTQ7Z2G1 175 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 SNX29P2Q8IUI4 249 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 APRG1Q8IVJ8 170 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 STPG3Q8N7X2 389 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 TMEM116Q8NCL8 245 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 OR4A16Q8NH70 328 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 LINC00476Q8WZB0 136 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 TXN2Q99757 166 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 MAP6D1Q9H9H5 199 aa9.01□□□□□ -0.97
VPS16-208ENST00000487461 YIF1AO95070 293 aa9□□□□□ -0.97
VPS16-208ENST00000487461 LY6G6CO95867 125 aa9□□□□□ -0.97
VPS16-208ENST00000487461 MT-CO2P00403 227 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms