RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RAB3BP20337 219 aa11.09□□□□□ -0.63
MCF2L-228ENST00000487354 C4BPBP20851 252 aa11.09□□□□□ -0.63
MCF2L-228ENST00000487354 FCGR2CP31995 323 aa11.09□□□□□ -0.63
MCF2L-228ENST00000487354 CMC4P56277 68 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-228ENST00000487354 Q56UQ5 140 aa11.09□□□□□ -0.63
MCF2L-228ENST00000487354 ZNF818PQ6ZRF7 136 aa11.09□□□□□ -0.63
MCF2L-228ENST00000487354 HSD17B13Q7Z5P4 300 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-228ENST00000487354 ZNF575Q86XF7 245 aa11.09□□□□□ -0.63
MCF2L-228ENST00000487354 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
MCF2L-228ENST00000487354 PLEKHA2Q9HB19 425 aa11.09□□□□□ -0.63
MCF2L-228ENST00000487354 SCN3BQ9NY72 215 aa11.09□□□□□ -0.63
MCF2L-228ENST00000487354 CELA1Q9UNI1 258 aa11.09□□□□□ -0.63
MCF2L-228ENST00000487354 TRAV10A0A0B4J240 114 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 DBX1A6NMT0 343 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 RGS10O43665 173 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 APOHP02749 345 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-228ENST00000487354 PVRIGQ6DKI7 326 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 POM121L12Q8N7R1 296 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 ZBTB34Q8NCN2 500 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 OR51H1Q8NH63 302 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 ST8SIA2Q92186 375 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 LSM10Q969L4 123 aaKnown RBP11.08□□□□□ -0.64
MCF2L-228ENST00000487354 DGCR14Q96DF8 476 aaKnown RBP11.08□□□□□ -0.64
MCF2L-228ENST00000487354 RNF126Q9BV68 326 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 VSIRQ9H7M9 311 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 COMMD9Q9P000 198 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 NACAE9PAV3 2078 aa11.08□□□□□ -0.64
MCF2L-228ENST00000487354 APOBP04114 4563 aaKnown RBP11.08□□□□□ -0.64
MCF2L-228ENST00000487354 I3L2K1 104 aa11.07□□□□□ -0.64
MCF2L-228ENST00000487354 GNG2P59768 71 aa11.07□□□□□ -0.64
MCF2L-228ENST00000487354 DEFB131AP59861 70 aa11.07□□□□□ -0.64
MCF2L-228ENST00000487354 TCF24Q7RTU0 167 aa11.07□□□□□ -0.64
MCF2L-228ENST00000487354 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
MCF2L-228ENST00000487354 DMBX1Q8NFW5 382 aa11.07□□□□□ -0.64
MCF2L-228ENST00000487354 OR1L8Q8NGR8 309 aa11.07□□□□□ -0.64
MCF2L-228ENST00000487354 SLC5A7Q9GZV3 580 aa11.07□□□□□ -0.64
MCF2L-228ENST00000487354 NXF2Q9GZY0 626 aaKnown RBP11.07□□□□□ -0.64
MCF2L-228ENST00000487354 MS4A6AQ9H2W1 248 aa11.07□□□□□ -0.64
MCF2L-228ENST00000487354 NDUFB11Q9NX14 153 aa11.07□□□□□ -0.64
MCF2L-228ENST00000487354 NSG2Q9Y328 171 aa11.07□□□□□ -0.64
MCF2L-228ENST00000487354 TRDV1A0A1B0GX56 115 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 MARCH11A6NNE9 402 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 M0R2N4 97 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 CYB5BO43169 146 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 MIFP14174 115 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 MYL9P24844 172 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 RELQ04864 619 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-228ENST00000487354 CATR1Q13166 79 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 C12orf74Q32Q52 190 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 PRSS48Q7RTY5 328 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 CSNK1G2-AS1Q8NCQ2 148 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 BEST4Q8NFU0 473 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 TPRKBQ9Y3C4 175 aa11.06□□□□□ -0.64
MCF2L-228ENST00000487354 TRAV14DV4A0A0A6YYC5 116 aa11.05□□□□□ -0.64
MCF2L-228ENST00000487354 DFFBO76075 338 aa11.05□□□□□ -0.64
MCF2L-228ENST00000487354 TBCEQ15813 527 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-228ENST00000487354 C22orf42Q6IC83 251 aa11.05□□□□□ -0.64
MCF2L-228ENST00000487354 Q6ZR54 194 aa11.05□□□□□ -0.64
MCF2L-228ENST00000487354 ZNF767PQ75MW2 155 aa11.05□□□□□ -0.64
MCF2L-228ENST00000487354 HOGA1Q86XE5 327 aa11.05□□□□□ -0.64
MCF2L-228ENST00000487354 OR1P1Q8NH06 330 aa11.05□□□□□ -0.64
MCF2L-228ENST00000487354 HINT2Q9BX68 163 aa11.05□□□□□ -0.64
MCF2L-228ENST00000487354 ZFAND3Q9H8U3 227 aa11.05□□□□□ -0.64
MCF2L-228ENST00000487354 OR51B2Q9Y5P1 312 aa11.05□□□□□ -0.64
MCF2L-228ENST00000487354 HERC1Q15751 4861 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 TRAV2A0A0B4J234 112 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 YIF1AO95070 293 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 IGHV3-48P01763 117 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 GNRHRP30968 328 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 FXYD4P59646 89 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 ARPC4P59998 168 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 LGALS9BQ3B8N2 356 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 AADACL3Q5VUY0 350 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 CADM3Q8N126 398 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 LGALS14Q8TCE9 139 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 GIMAP1Q8WWP7 306 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 SLC25A38Q96DW6 304 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 CCDC90BQ9GZT6 254 aa11.04□□□□□ -0.64
MCF2L-228ENST00000487354 IGHV3-66A0A0C4DH42 116 aa11.03□□□□□ -0.64
MCF2L-228ENST00000487354 NOTOA8MTQ0 251 aa11.03□□□□□ -0.64
MCF2L-228ENST00000487354 AQP4P55087 323 aa11.03□□□□□ -0.64
MCF2L-228ENST00000487354 TOMM20LQ6UXN7 152 aa11.03□□□□□ -0.64
MCF2L-228ENST00000487354 ZNF367Q7RTV3 350 aa11.03□□□□□ -0.64
MCF2L-228ENST00000487354 TMEM17Q86X19 198 aa11.03□□□□□ -0.64
MCF2L-228ENST00000487354 FCAMRQ8WWV6 532 aa11.03□□□□□ -0.64
MCF2L-228ENST00000487354 SLC25A46Q96AG3 418 aa11.03□□□□□ -0.64
MCF2L-228ENST00000487354 CMTM3Q96MX0 182 aa11.03□□□□□ -0.64
MCF2L-228ENST00000487354 TMEM14BQ9NUH8 114 aa11.03□□□□□ -0.64
MCF2L-228ENST00000487354 DEFB131BA0A096LNP1 70 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 CD74P04233 296 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 RLN1P04808 185 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 FCER2P06734 321 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 P0DMU3 169 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 FAM231AP0DMU4 169 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 FAM231CP0DMU5 169 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 G6PCP35575 357 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 STHQ8IWL8 128 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 ZNF114Q8NC26 417 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 TXN2Q99757 166 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 RHBDL2Q9NX52 303 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms