RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 OR9G9P0C7N8 305 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 IGLC1P0CG04 106 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 NTF4P34130 210 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 CEBPDP49716 269 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-209ENST00000487188 RBPJQ06330 500 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 EDDM3AQ14507 147 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 DAZAP2Q15038 168 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-209ENST00000487188 ZNF497Q6ZNH5 498 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 GRAMD2BQ96HH9 432 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 MCRIP2Q9BUT9 160 aaKnown RBP5.18□□□□□ -1.58
VPS13D-209ENST00000487188 PHF7Q9BWX1 381 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-209ENST00000487188 GTSF1LQ9H1H1 148 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 JKAMPQ9P055 326 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 CHCHD2Q9Y6H1 151 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-209ENST00000487188 PCDH15Q96QU1 1955 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 C5orf42Q9H799 3197 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 IGLV2-14P01704 120 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 FABP2P12104 132 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 IGFBP2P18065 325 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 GDF1P27539 372 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 RTL8BQ17RB0 113 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 LYSMD4Q5XG99 296 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 KIR3DL3Q8N743 410 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 NABP2Q9BQ15 211 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 PKIBQ9C010 78 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 FGF23Q9GZV9 251 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-209ENST00000487188 GP6Q9HCN6 339 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 KIAA1549Q9HCM3 1950 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 TEX50A0A1B0GTY4 177 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 OOEPA6NGQ2 149 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 HIGD1CA8MV81 97 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 C12orf77C9JDV5 145 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 J3QR06 171 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 DNPH1O43598 174 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 ZIC3O60481 467 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 OR5AL1P0C617 328 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 AREGP15514 252 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 AESQ08117 197 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 VKORC1L1Q8N0U8 176 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 S1PR3Q99500 378 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 MS4A6AQ9H2W1 248 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 OCIAD1Q9NX40 245 aa5.18□□□□□ -1.58
VPS13D-209ENST00000487188 A0A1W2PRE2 83 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 SMIM27A0A1W2PRY6 76 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 HBBP68871 147 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 SCGB2A2Q13296 93 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 WIPI1Q5MNZ9 446 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-209ENST00000487188 RASL11AQ6T310 242 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 FA2HQ7L5A8 372 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 ADTRPQ96IZ2 230 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 TCF19Q9Y242 345 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 NDUFS8O00217 210 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 ASPHD1Q5U4P2 390 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 DHRS13Q6UX07 377 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 RPS19BP1Q86WX3 136 aaKnown RBP5.17□□□□□ -1.58
VPS13D-209ENST00000487188 NUP35Q8NFH5 326 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 SIGMAR1Q99720 223 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 OBP2BQ9NPH6 170 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 PRDM6Q9NQX0 595 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 SLC25A10Q9UBX3 287 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-209ENST00000487188 A0A0G2JLM5 398 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 C2orf70A6NJV1 201 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 G3V4G9 280 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 LINC00205P59089 165 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 OR1C1Q15619 314 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 TPRX1Q8N7U7 411 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 OR5A1Q8NGJ0 315 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 OR52E5Q8NH55 327 aa5.17□□□□□ -1.58
VPS13D-209ENST00000487188 K7EP34 96 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 IGHV3-13P01766 116 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 IGHV3-7P01780 117 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 CD27P26842 260 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 BHLHA15Q7RTS1 189 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-209ENST00000487188 LHFPL4Q7Z7J7 247 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 OR8A1Q8NGG7 326 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 CHCHD1Q96BP2 118 aaKnown RBP5.16□□□□□ -1.58
VPS13D-209ENST00000487188 AMMECR1Q9Y4X0 333 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-209ENST00000487188 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-209ENST00000487188 C9orf118A6NHY6 69 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 C5orf67F2Z3F1 127 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 COX7A2P2O60397 106 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 FAM53AQ6NSI3 398 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-209ENST00000487188 Q6P435 159 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 Q6ZS52 159 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 LINC00173Q6ZV60 143 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 CXorf67Q86X51 503 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-209ENST00000487188 SNRNP40Q96DI7 357 aaKnown RBP5.16□□□□□ -1.58
VPS13D-209ENST00000487188 PGLYRP4Q96LB8 373 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 CLUHP3Q96NS8 147 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 HES4Q9HCC6 221 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 TMEM140Q9NV12 185 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 THYN1Q9P016 225 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 IGHV1-24A0A0C4DH33 117 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 ZNF716A6NP11 495 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 LINC01565O15544 149 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 SLC25A5P05141 298 aaKnown RBP5.16□□□□□ -1.58
VPS13D-209ENST00000487188 C8orf88P0DMB2 117 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 CSN1S1P47710 185 aa5.16□□□□□ -1.58
VPS13D-209ENST00000487188 KLF5Q13887 457 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms