RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 HPGDSO60760 199 aa18.3■□□□□ 0.52
LIME1-206ENST00000487026 ADMP35318 185 aa18.3■□□□□ 0.52
LIME1-206ENST00000487026 OR2C3Q8N628 320 aa18.3■□□□□ 0.52
LIME1-206ENST00000487026 TMEM56Q96MV1 263 aa18.3■□□□□ 0.52
LIME1-206ENST00000487026 OVOL2Q9BRP0 275 aa18.3■□□□□ 0.52
LIME1-206ENST00000487026 TMEM14BQ9NUH8 114 aa18.3■□□□□ 0.52
LIME1-206ENST00000487026 FKBP11Q9NYL4 201 aa18.3■□□□□ 0.52
LIME1-206ENST00000487026 PLECQ15149 4684 aaKnown RBP18.3■□□□□ 0.52
LIME1-206ENST00000487026 HYDINQ4G0P3 5121 aa18.3■□□□□ 0.52
LIME1-206ENST00000487026 C15orf61A6NNL5 157 aa18.29■□□□□ 0.52
LIME1-206ENST00000487026 IGKV1-39P01597 117 aa18.29■□□□□ 0.52
LIME1-206ENST00000487026 IGKV1D-39P04432 117 aa18.29■□□□□ 0.52
LIME1-206ENST00000487026 Q56UQ5 140 aa18.29■□□□□ 0.52
LIME1-206ENST00000487026 LPCAT3Q6P1A2 487 aa18.29■□□□□ 0.52
LIME1-206ENST00000487026 SPSB3Q6PJ21 355 aa18.29■□□□□ 0.52
LIME1-206ENST00000487026 OR5B3Q8NH48 314 aa18.29■□□□□ 0.52
LIME1-206ENST00000487026 SCPEP1Q9HB40 452 aa18.29■□□□□ 0.52
LIME1-206ENST00000487026 DAZ1Q9NQZ3 744 aaKnown RBP18.29■□□□□ 0.52
LIME1-206ENST00000487026 EPPK1P58107 5090 aaKnown RBP18.29■□□□□ 0.52
LIME1-206ENST00000487026 NDUFA4O00483 81 aa18.28■□□□□ 0.52
LIME1-206ENST00000487026 RNASE12Q5GAN4 147 aaKnown RBP18.28■□□□□ 0.52
LIME1-206ENST00000487026 SLC38A6Q8IZM9 456 aa18.28■□□□□ 0.52
LIME1-206ENST00000487026 SEC22AQ96IW7 307 aa18.28■□□□□ 0.52
LIME1-206ENST00000487026 CMTM3Q96MX0 182 aa18.28■□□□□ 0.52
LIME1-206ENST00000487026 M0QYG6 137 aa18.27■□□□□ 0.52
LIME1-206ENST00000487026 S100GP29377 79 aa18.27■□□□□ 0.52
LIME1-206ENST00000487026 RCVRNP35243 200 aa18.27■□□□□ 0.52
LIME1-206ENST00000487026 H2BFWTQ7Z2G1 175 aa18.27■□□□□ 0.52
LIME1-206ENST00000487026 TSC22D3Q99576 134 aa18.27■□□□□ 0.52
LIME1-206ENST00000487026 SPAG8Q99932 426 aaPredicted RBP18.27■□□□□ 0.52
LIME1-206ENST00000487026 TSPAN4O14817 238 aa18.26■□□□□ 0.51
LIME1-206ENST00000487026 CTSGP08311 255 aa18.26■□□□□ 0.51
LIME1-206ENST00000487026 OR1P1Q8NH06 330 aa18.26■□□□□ 0.51
LIME1-206ENST00000487026 OR4A16Q8NH70 328 aa18.26■□□□□ 0.51
LIME1-206ENST00000487026 MISP3Q96FF7 219 aa18.26■□□□□ 0.51
LIME1-206ENST00000487026 IGHV3-48P01763 117 aa18.25■□□□□ 0.51
LIME1-206ENST00000487026 UCP3P55916 312 aa18.25■□□□□ 0.51
LIME1-206ENST00000487026 LAMTOR1Q6IAA8 161 aa18.25■□□□□ 0.51
LIME1-206ENST00000487026 MRGPRFQ96AM1 343 aa18.25■□□□□ 0.51
LIME1-206ENST00000487026 ZNF414Q96IQ9 312 aa18.25■□□□□ 0.51
LIME1-206ENST00000487026 ATP6V0BQ99437 205 aa18.25■□□□□ 0.51
LIME1-206ENST00000487026 FAM212BQ9NTI7 297 aaPredicted RBP18.25■□□□□ 0.51
LIME1-206ENST00000487026 FAM25AB3EWG3 89 aa18.24■□□□□ 0.51
LIME1-206ENST00000487026 FAM25CB3EWG5 89 aa18.24■□□□□ 0.51
LIME1-206ENST00000487026 FAM25GB3EWG6 89 aa18.24■□□□□ 0.51
LIME1-206ENST00000487026 RORCP51449 518 aa18.24■□□□□ 0.51
LIME1-206ENST00000487026 IZUMO4Q1ZYL8 232 aa18.24■□□□□ 0.51
LIME1-206ENST00000487026 NAA50Q9GZZ1 169 aaKnown RBP18.24■□□□□ 0.51
LIME1-206ENST00000487026 I3L2K1 104 aa18.23■□□□□ 0.51
LIME1-206ENST00000487026 K7EMT4 169 aa18.23■□□□□ 0.51
LIME1-206ENST00000487026 JTBO76095 146 aa18.23■□□□□ 0.51
LIME1-206ENST00000487026 CTSDP07339 412 aaPredicted RBP18.23■□□□□ 0.51
LIME1-206ENST00000487026 PI3P19957 117 aa18.23■□□□□ 0.51
LIME1-206ENST00000487026 ODF3L2Q3SX64 289 aa18.23■□□□□ 0.51
LIME1-206ENST00000487026 SPINK9Q5DT21 86 aa18.23■□□□□ 0.51
LIME1-206ENST00000487026 KLK11Q9UBX7 282 aa18.23■□□□□ 0.51
LIME1-206ENST00000487026 IGHV3-49A0A0A0MS15 119 aa18.22■□□□□ 0.51
LIME1-206ENST00000487026 SMPXQ9UHP9 88 aa18.22■□□□□ 0.51
LIME1-206ENST00000487026 C15orf62A8K5M9 175 aa18.21■□□□□ 0.51
LIME1-206ENST00000487026 YIF1AO95070 293 aa18.21■□□□□ 0.51
LIME1-206ENST00000487026 MT-CO2P00403 227 aa18.21■□□□□ 0.51
LIME1-206ENST00000487026 PGAM2P15259 253 aa18.21■□□□□ 0.51
LIME1-206ENST00000487026 MFAP4P55083 255 aa18.21■□□□□ 0.51
LIME1-206ENST00000487026 HSPE1P61604 102 aaKnown RBP18.21■□□□□ 0.51
LIME1-206ENST00000487026 PRCDQ00LT1 54 aa18.21■□□□□ 0.51
LIME1-206ENST00000487026 RNF2Q99496 336 aa18.21■□□□□ 0.51
LIME1-206ENST00000487026 ALMS1Q8TCU4 4167 aa18.2■□□□□ 0.5
LIME1-206ENST00000487026 NUPL2O15504 423 aaKnown RBP18.2■□□□□ 0.5
LIME1-206ENST00000487026 RPL35AP18077 110 aaKnown RBP18.2■□□□□ 0.5
LIME1-206ENST00000487026 MZT2AQ6P582 158 aa18.2■□□□□ 0.5
LIME1-206ENST00000487026 OR52I2Q8NH67 350 aa18.2■□□□□ 0.5
LIME1-206ENST00000487026 PINX1Q96BK5 328 aaKnown RBP18.2■□□□□ 0.5
LIME1-206ENST00000487026 RHPN1-AS1Q9BWJ2 59 aa18.2■□□□□ 0.5
LIME1-206ENST00000487026 IGHV3OR16-13A0A075B7E8 117 aa18.19■□□□□ 0.5
LIME1-206ENST00000487026 IGHV3-74A0A0B4J1X5 117 aa18.19■□□□□ 0.5
LIME1-206ENST00000487026 IGHV7-4-1A0A0J9YVY3 117 aa18.19■□□□□ 0.5
LIME1-206ENST00000487026 OR4C46A6NHA9 309 aa18.19■□□□□ 0.5
LIME1-206ENST00000487026 SPRY2O43597 315 aa18.19■□□□□ 0.5
LIME1-206ENST00000487026 CD3DP04234 171 aa18.19■□□□□ 0.5
LIME1-206ENST00000487026 APOC4P55056 127 aa18.19■□□□□ 0.5
LIME1-206ENST00000487026 EWSR1Q01844 656 aaKnown RBP eCLIP18.19■□□□□ 0.5
LIME1-206ENST00000487026 RELQ04864 619 aaPredicted RBP18.19■□□□□ 0.5
LIME1-206ENST00000487026 DEFB135Q30KP9 77 aa18.19■□□□□ 0.5
LIME1-206ENST00000487026 TMEM116Q8NCL8 245 aa18.19■□□□□ 0.5
LIME1-206ENST00000487026 IGKV3-7A0A075B6H7 116 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 A0A0J9YWU9 116 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 CHEK1O14757 476 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 IGKV1-5P01602 117 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 TFPI2P48307 235 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 PIGPP57054 158 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 ERHP84090 104 aaKnown RBP18.18■□□□□ 0.5
LIME1-206ENST00000487026 CTF1Q16619 201 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 RNASE10Q5GAN6 216 aaKnown RBP18.18■□□□□ 0.5
LIME1-206ENST00000487026 APRG1Q8IVJ8 170 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 ZNF114Q8NC26 417 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 TP53RKQ96S44 253 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 TXN2Q99757 166 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 NXF2Q9GZY0 626 aaKnown RBP18.18■□□□□ 0.5
LIME1-206ENST00000487026 EXTL2Q9UBQ6 330 aa18.18■□□□□ 0.5
LIME1-206ENST00000487026 FCGR2BP31994 310 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms