RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 ACP1P24666 158 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 DNLZQ5SXM8 178 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 OR4A47Q6IF82 309 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 FAM214BQ7L5A3 538 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 MOB1BQ7L9L4 216 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 ZCCHC24Q8N2G6 241 aaKnown RBP10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 NCOR1P1Q9H4R4 102 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 KLK10O43240 276 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 CD99P14209 185 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 IGHV1-2P23083 117 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 PRB3Q04118 309 aaPredicted RBP10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 IBA57Q5T440 356 aaKnown RBP10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 OR2T6Q8NHC8 308 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 ALKBH7Q9BT30 221 aaPredicted RBP10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 SEPSECSQ9HD40 501 aaKnown RBP10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 IL36BQ9NZH7 164 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 METRNQ9UJH8 293 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 H3BTX0 84 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 CCL8P80075 99 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 FOXF2Q12947 444 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 RPL39P5Q59GN2 51 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 ZNF645Q8N7E2 425 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 ZNF355PQ9NSJ1 428 aa10.28□□□□□ -0.76
SHROOM3-208ENST00000486758 GCHFRP30047 84 aa10.27□□□□□ -0.76
SHROOM3-208ENST00000486758 TMEM14EPQ6UXP3 125 aa10.27□□□□□ -0.76
SHROOM3-208ENST00000486758 C11orf1Q9H5F2 150 aa10.27□□□□□ -0.76
SHROOM3-208ENST00000486758 UQCRFS1P47985 274 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 ACSF3Q4G176 576 aaPredicted RBP10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 LHFPL4Q7Z7J7 247 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 Q8IYB0 196 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 SH2D2AQ9NP31 389 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 ZFP30Q9Y2G7 519 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A10PA6NDY2 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A18PA6NE21 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A16PA6NEW6 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A20PA6NIJ5 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A8PA6NJQ4 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A7PA6NKC0 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A22PA8MWA6 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A12PA8MX19 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A5PA8MXJ8 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A23PA8MXZ1 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A15PP0C7V4 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A13PP0C7W8 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A14PP0C7W9 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A24PP0C7X0 464 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 UBE2G1P62253 170 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 UBE2L3P68036 154 aaKnown RBP10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 GABRA6Q16445 453 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 SSX8Q7RTT4 187 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 ZNF295-AS1Q8N0V1 137 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 ZADH2Q8N4Q0 377 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 OR13A1Q8NGR1 328 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 OR8B2Q96RD0 313 aa10.27□□□□□ -0.77
SHROOM3-208ENST00000486758 LDLRAD2Q5SZI1 272 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 TEPPQ6URK8 271 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 MIR17HGQ75NE6 70 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 STPG3Q8N7X2 389 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 RNASE8Q8TDE3 154 aaKnown RBP10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 DAZAP1Q96EP5 407 aaKnown RBP10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 AGMATQ9BSE5 352 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 CLEC5AQ9NY25 188 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 PTPN13Q12923 2485 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 TRAV17A0A0B4J275 112 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 YTHDF2Q9Y5A9 579 aaKnown RBP10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 CUBNO60494 3623 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 M0QZ24 198 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 OR9G9P0C7N8 305 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 IGFBP2P18065 325 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 NPY1RP25929 384 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 ASCL4Q6XD76 172 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 BCL2L2Q92843 193 aaPredicted RBP10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 LOXL4Q96JB6 756 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 RCHY1Q96PM5 261 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 TIMM9Q9Y5J7 89 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 COL12A1Q99715 3063 aa10.26□□□□□ -0.77
SHROOM3-208ENST00000486758 TMPRSS2O15393 492 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 CYC1P08574 325 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 C3orf79P0CE67 100 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 MYOD1P15172 320 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 PRDX2P32119 198 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 RBMXL3Q8N7X1 1067 aaKnown RBP10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 CCL17Q92583 94 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 GMPPAQ96IJ6 420 aaPredicted RBP10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 OR2V2Q96R30 315 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 TRBV20OR9-2A0A075B6H5 130 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 FBLL1A6NHQ2 334 aaKnown RBP10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 CIDEAO60543 219 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 CECR9P0C854 216 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 WDR73Q6P4I2 378 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 FOXL2NBQ6ZUU3 175 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 PYGO2Q9BRQ0 406 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 HSPB7Q9UBY9 170 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 IGHV3-21A0A0B4J1V1 117 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 KIR2DL5BA0A0G2JN68 375 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 KIR2DL5BA0A0G2JPC4 375 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 OOEPA6NGQ2 149 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 NUDT3O95989 172 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 IL6RP08887 468 aaPredicted RBP10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 RPL8P62917 257 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms