RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 STX5Q13190 355 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 ELOBQ15370 118 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 SPANXN3Q5MJ09 141 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 OR8B3Q8NGG8 313 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 OR13C4Q8NGS5 318 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 RASSF5Q8WWW0 418 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 C11orf40Q8WZ69 217 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 TMEM106AQ96A25 262 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 NIPSNAP1Q9BPW8 284 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 CMSS1Q9BQ75 279 aaKnown RBP1.69□□□□□ -2.14
SMC4-218ENST00000486711 FBXL12Q9NXK8 326 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 AMMECR1Q9Y4X0 333 aaPredicted RBP1.69□□□□□ -2.14
SMC4-218ENST00000486711 DOCK10Q96BY6 2186 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 GBF1Q92538 1859 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 WDR90Q96KV7 1748 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 IGKV2-29A2NJV5 120 aaPredicted RBP1.68□□□□□ -2.14
SMC4-218ENST00000486711 OR4C46A6NHA9 309 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 TRAPPC2LH3BP13 241 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 FAAHO00519 579 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 IFNA10P01566 189 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 GPX2P18283 190 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 SUPT4H1P63272 117 aaKnown RBP1.68□□□□□ -2.14
SMC4-218ENST00000486711 SPA17Q15506 151 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 ARHGAP11BQ3KRB8 267 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 KRTAP21-3Q3LHN1 58 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 DEFB119Q8N690 84 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 ZNF565Q8N9K5 539 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 MRPL32Q9BYC8 188 aaKnown RBP1.68□□□□□ -2.14
SMC4-218ENST00000486711 MRPL27Q9P0M9 148 aaKnown RBP1.68□□□□□ -2.14
SMC4-218ENST00000486711 BAIAP2Q9UQB8 552 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 TMEM56-RWDD3S4R434 201 aa1.68□□□□□ -2.14
SMC4-218ENST00000486711 TRAV9-1A0A075B6T8 112 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 DPRXA6NFQ7 191 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 TMEM114B3SHH9 223 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 PMP2P02689 132 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 TTRP02766 147 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 TCRBP04435 133 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 ZNF705BP0CI00 300 aaPredicted RBP1.67□□□□□ -2.14
SMC4-218ENST00000486711 ZNF80P51504 273 aaPredicted RBP1.67□□□□□ -2.14
SMC4-218ENST00000486711 MOGQ16653 247 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 FAM173BQ6P4H8 233 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 AAED1Q7RTV5 226 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 DHFR2Q86XF0 187 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 BORCS7Q96B45 105 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 TOMM6Q96B49 74 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 SCGB3A1Q96QR1 104 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 GINS4Q9BRT9 223 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 TRIM4Q9C037 500 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 C11orf68Q9H3H3 251 aaKnown RBP1.67□□□□□ -2.14
SMC4-218ENST00000486711 SLC22A13Q9Y226 551 aa1.67□□□□□ -2.14
SMC4-218ENST00000486711 MDC1Q14676 2089 aaKnown RBP1.67□□□□□ -2.14
SMC4-218ENST00000486711 WRNQ14191 1432 aaPredicted RBP eCLIP1.66□□□□□ -2.14
SMC4-218ENST00000486711 EXOC1LA0A1B0GW35 172 aa1.66□□□□□ -2.14
SMC4-218ENST00000486711 PIRO00625 290 aa1.66□□□□□ -2.14
SMC4-218ENST00000486711 RPSAP08865 295 aaKnown RBP1.66□□□□□ -2.14
SMC4-218ENST00000486711 LSM6P62312 80 aaKnown RBP1.66□□□□□ -2.14
SMC4-218ENST00000486711 SRSF6Q13247 344 aaKnown RBP1.66□□□□□ -2.14
SMC4-218ENST00000486711 EDDM3AQ14507 147 aa1.66□□□□□ -2.14
SMC4-218ENST00000486711 WFDC11Q8NEX6 87 aa1.66□□□□□ -2.14
SMC4-218ENST00000486711 Q96M85 177 aa1.66□□□□□ -2.14
SMC4-218ENST00000486711 TSPAN32Q96QS1 320 aa1.66□□□□□ -2.14
SMC4-218ENST00000486711 TMEM147Q9BVK8 224 aa1.66□□□□□ -2.14
SMC4-218ENST00000486711 NUP155O75694 1391 aa1.66□□□□□ -2.14
SMC4-218ENST00000486711 MTUS2Q5JR59 1369 aa1.66□□□□□ -2.14
SMC4-218ENST00000486711 TRBV6-5A0A0K0K1A5 114 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 SMIM9A6NGZ8 99 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 IBA57-AS1B1ANH7 110 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 IGKV1-5P01602 117 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 RPS20P60866 119 aaKnown RBP1.65□□□□□ -2.15
SMC4-218ENST00000486711 RANP62826 216 aaKnown RBP1.65□□□□□ -2.15
SMC4-218ENST00000486711 NNATQ16517 81 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 FP248Q71RG6 208 aaPredicted RBP1.65□□□□□ -2.15
SMC4-218ENST00000486711 BPIFA4PQ86YQ2 179 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 KRT222Q8N1A0 295 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 LINC00471Q8N535 108 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 DNAJC9Q8WXX5 260 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 YIPF3Q9GZM5 350 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 CCDC90BQ9GZT6 254 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 DCSTAMPQ9H295 470 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 SLC39A9Q9NUM3 307 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 GLTPQ9NZD2 209 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 CKLFQ9UBR5 152 aa1.65□□□□□ -2.15
SMC4-218ENST00000486711 KIF24Q5T7B8 1368 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 TRAV26-2A0A0B4J265 109 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 TRAPPC13A5PLN9 417 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 CNIH1O95406 144 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 PRB1P04280 392 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 UBBP0CG47 229 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 DEFA1P59665 94 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 AP3S2P59780 193 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 CCL7P80098 99 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 FADDQ13158 208 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 ZNF345Q14585 488 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 CDK10Q15131 360 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 KISS1Q15726 138 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 Q1T7F1 81 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 OR6V1Q8N148 313 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 H1FXQ92522 213 aaKnown RBP1.64□□□□□ -2.15
SMC4-218ENST00000486711 KIAA2026Q5HYC2 2103 aa1.64□□□□□ -2.15
SMC4-218ENST00000486711 A0A087WUJ7 227 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms