RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 VKORC1L1Q8N0U8 176 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 OR1L8Q8NGR8 309 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 ZNRF2Q8NHG8 242 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 C8orf46Q8TAG6 207 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 RBPMSQ93062 196 aaKnown RBP5.4□□□□□ -1.54
HDAC3-209ENST00000486618 SPTSSAQ969W0 71 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 CNBD2Q96M20 576 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 Q96M85 177 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 CCL13Q99616 98 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 B9D2Q9BPU9 175 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 DCTN5Q9BTE1 182 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 RBM38Q9H0Z9 239 aaKnown RBP5.4□□□□□ -1.54
HDAC3-209ENST00000486618 Q9H521 79 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 RNF167Q9H6Y7 350 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 EXOSC4Q9NPD3 245 aaKnown RBP5.4□□□□□ -1.54
HDAC3-209ENST00000486618 PLSCR3Q9NRY6 295 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 V9GYS6 101 aa5.4□□□□□ -1.54
HDAC3-209ENST00000486618 IGHV3OR15-7A0A075B7D8 119 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 TMEM189A5PLL7 270 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 A8MWP6 167 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF732B4DXR9 585 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 C3orf84H3BNL1 204 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 HSPB6O14558 160 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 NHLRC4P0CG21 123 aaPredicted RBP5.39□□□□□ -1.55
HDAC3-209ENST00000486618 HSD17B1P14061 328 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 TNFRSF1BP20333 461 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 RAB3BP20337 219 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 FGF7P21781 194 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 ZBTB25P24278 435 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 HCCSP53701 268 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 SLC35A2P78381 396 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 HOXA4Q00056 320 aaPredicted RBP5.39□□□□□ -1.55
HDAC3-209ENST00000486618 COL10A1Q03692 680 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 C4orf26Q17RF5 130 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 MICAQ29983 383 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 MESTQ5EB52 335 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 WDR38Q5JTN6 314 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 C1orf194Q5T5A4 169 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 FAM162BQ5T6X4 162 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 C1orf195Q5TG92 126 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF826PQ6ZT77 177 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 COX8CQ7Z4L0 72 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 PNKDQ8N490 385 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 PACRGLQ8N7B6 248 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 Q8N7P7 452 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 OR8S1Q8NH09 359 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 TMED6Q8WW62 240 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 H1FXQ92522 213 aaKnown RBP5.39□□□□□ -1.55
HDAC3-209ENST00000486618 DIRAS2Q96HU8 199 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 RASL11BQ9BPW5 248 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF649Q9BS31 505 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 MLST8Q9BVC4 326 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 PRSS22Q9GZN4 317 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 CST9LQ9H4G1 147 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 SERTAD4Q9NUC0 356 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 COMMD9Q9P000 198 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 TRAPPC2LQ9UL33 140 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 LHFPL6Q9Y693 200 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 U3KQ87 197 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 RYR3Q15413 4870 aa5.39□□□□□ -1.55
HDAC3-209ENST00000486618 WI2-2373I1.2A0A1W2PRP0 233 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 TMEM218A2RU14 115 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 OR4C46A6NHA9 309 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 C1orf196B1AJZ1 125 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 FAM220BPB1ANY3 271 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 MFNGO00587 321 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 SOCS2O14508 198 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 SOX15O60248 233 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 GNG7O60262 68 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 SOX14O95416 240 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 CLIC3O95833 236 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 TOMM40O96008 361 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 OR5H8P0DN80 308 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 SLC2A2P11168 524 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-209ENST00000486618 CHATP28329 748 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 S100A2P29034 98 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 MNDAP41218 407 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 CRYBA2P53672 197 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 PRB3Q04118 309 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-209ENST00000486618 PNRC1Q12796 327 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-209ENST00000486618 FHL1Q13642 323 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 RHEBQ15382 184 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 RSPO1Q2MKA7 263 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-209ENST00000486618 KRTAP27-1Q3LI81 207 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 COL5A1-AS1Q5SY13 56 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 DHRS11Q6UWP2 260 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 ADAMTSL5Q6ZMM2 481 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 HSD17B13Q7Z5P4 300 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-209ENST00000486618 Q8N2B8 174 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 FAM216BQ8N7L0 139 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF485Q8NCK3 441 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 ZFAND1Q8TCF1 268 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 LRRC29Q8WV35 223 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 TFAP2CQ92754 450 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 GPR82Q96P67 336 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 CARHSP1Q9Y2V2 147 aaKnown RBP5.38□□□□□ -1.55
HDAC3-209ENST00000486618 IER3IP1Q9Y5U9 82 aa5.38□□□□□ -1.55
HDAC3-209ENST00000486618 TRAV30A0A087WSZ9 112 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 UNC119BA6NIH7 251 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 M0R135 149 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms